bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_0752_orf2
Length=205
Score E
Sequences producing significant alignments: (Bits) Value
5833.PFE1005w 304 1e-81
> 5833.PFE1005w
Length=189
Score = 304 bits (779), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 149/183 (81%), Positives = 166/183 (90%), Gaps = 0/183 (0%)
Query 18 MPKSYRNQSKTARNPKRPFEKERLDQELRLLGEYGLKNKREVWRVQYALAKIRSAARELL 77
MPKSYRN SKTARNPKRPFEKERLDQEL+L+GEYGLKNKRE+WRVQY LAKIRSAAR LL
Sbjct 1 MPKSYRNYSKTARNPKRPFEKERLDQELKLIGEYGLKNKREIWRVQYLLAKIRSAARYLL 60
Query 78 TLEEKDPRRIFQGTALLRRMVRLGLLSEGEQKLDYVLGLTVQKFLERRLQTRVFKLGLAK 137
TL+EK +RIFQG ALLRRMVR GLL E E+KLDYVLGLT+ K LERRLQT+VFKLGLAK
Sbjct 61 TLDEKSSKRIFQGEALLRRMVRQGLLGENEEKLDYVLGLTLPKLLERRLQTKVFKLGLAK 120
Query 138 SIHHARCLIRQRHIRVGKQIVDIPSFMVRVDSEKYIEFSLTSPYGGGRPGRVKRKSLRGG 197
S+HHAR LIRQRHIRVGKQ+VDIPSF+VRVDSEK+I+F+ TSP+GG RPGRVKRKSL+
Sbjct 121 SVHHARVLIRQRHIRVGKQMVDIPSFLVRVDSEKHIDFATTSPFGGARPGRVKRKSLKKQ 180
Query 198 DDK 200
+K
Sbjct 181 KEK 183
Lambda K H
0.322 0.140 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 50836997767
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40