bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0725_orf1 Length=332 Score E Sequences producing significant alignments: (Bits) Value 5671.LinJ05.0760 273 9e-72 > 5671.LinJ05.0760 Length=824 Score = 273 bits (697), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 143/334 (42%), Positives = 191/334 (57%), Gaps = 68/334 (20%) Query 19 RELTGLPGLRDDFYYEVKDQILHCALSLVGEPIMYPRINELLHQMHQRRISTFLVTNAQH 78 +++ G+PG+ + + QI HCALSLVGEPIMYP+IN +HQ RIS+F+VTNAQ Sbjct 521 KQMRGVPGVTPE-RLAMAMQIRHCALSLVGEPIMYPQINGFCELLHQHRISSFMVTNAQF 579 Query 79 PDALRALRPVTQLYLSIDAATESDLKRLDKPVHRDSWLRFLSCIDILKTKKQRTVFRLTL 138 P+ LR L+PV QLYLSIDA T +LKR+D+P+ D W R LSC+ L K+QRTVFRLTL Sbjct 580 PEQLRNLKPVVQLYLSIDAPTPEELKRIDRPLFEDYWDRCLSCVKELARKQQRTVFRLTL 639 Query 139 VHGYNCILGPVGDAGASEPANNRNAASNSGSSTSNTKYAKGVTSTLDKYASLVLRGEPDM 198 V+ YN T + YA LV G+PD Sbjct 640 VNQYN-------------------------------------TENVKAYADLVEMGQPDF 662 Query 199 IEIKGMTFCGGLDRESLSMQ-NVPRHQQVLAFADGLRRALP---------------EG-- 240 IE+KG+T+CG +L+M+ NVPRH +V+ F L + EG Sbjct 663 IEVKGVTYCGTSSNSTLNMKDNVPRHDEVVGFCKALCAEMASRHPHYRTPQMDKEEEGGG 722 Query 241 ------------LYGLASEHEHSCCVLLANNKYFYKGQWHTWIDYPKFFDLALSGDLNFS 288 Y +A EHEHSCCVL+A +K+F+ G WHTWIDY +F+DL SG +F+ Sbjct 723 DVIVIPAEERNRPYHVACEHEHSCCVLIALDKFFFDGHWHTWIDYERFYDLVESGRTDFT 782 Query 289 GIDYSAATPSWAIFGAEGRGFDPQQKRVFGKGRR 322 +DY+A TP+WA + ++ +GFDP+Q RV K R Sbjct 783 SLDYAAVTPTWATYNSKEKGFDPEQTRVVRKNAR 816 Lambda K H 0.321 0.136 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 121909235772 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40