bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_0725_orf1
Length=332
Score E
Sequences producing significant alignments: (Bits) Value
5671.LinJ05.0760 273 9e-72
> 5671.LinJ05.0760
Length=824
Score = 273 bits (697), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 143/334 (42%), Positives = 191/334 (57%), Gaps = 68/334 (20%)
Query 19 RELTGLPGLRDDFYYEVKDQILHCALSLVGEPIMYPRINELLHQMHQRRISTFLVTNAQH 78
+++ G+PG+ + + QI HCALSLVGEPIMYP+IN +HQ RIS+F+VTNAQ
Sbjct 521 KQMRGVPGVTPE-RLAMAMQIRHCALSLVGEPIMYPQINGFCELLHQHRISSFMVTNAQF 579
Query 79 PDALRALRPVTQLYLSIDAATESDLKRLDKPVHRDSWLRFLSCIDILKTKKQRTVFRLTL 138
P+ LR L+PV QLYLSIDA T +LKR+D+P+ D W R LSC+ L K+QRTVFRLTL
Sbjct 580 PEQLRNLKPVVQLYLSIDAPTPEELKRIDRPLFEDYWDRCLSCVKELARKQQRTVFRLTL 639
Query 139 VHGYNCILGPVGDAGASEPANNRNAASNSGSSTSNTKYAKGVTSTLDKYASLVLRGEPDM 198
V+ YN T + YA LV G+PD
Sbjct 640 VNQYN-------------------------------------TENVKAYADLVEMGQPDF 662
Query 199 IEIKGMTFCGGLDRESLSMQ-NVPRHQQVLAFADGLRRALP---------------EG-- 240
IE+KG+T+CG +L+M+ NVPRH +V+ F L + EG
Sbjct 663 IEVKGVTYCGTSSNSTLNMKDNVPRHDEVVGFCKALCAEMASRHPHYRTPQMDKEEEGGG 722
Query 241 ------------LYGLASEHEHSCCVLLANNKYFYKGQWHTWIDYPKFFDLALSGDLNFS 288
Y +A EHEHSCCVL+A +K+F+ G WHTWIDY +F+DL SG +F+
Sbjct 723 DVIVIPAEERNRPYHVACEHEHSCCVLIALDKFFFDGHWHTWIDYERFYDLVESGRTDFT 782
Query 289 GIDYSAATPSWAIFGAEGRGFDPQQKRVFGKGRR 322
+DY+A TP+WA + ++ +GFDP+Q RV K R
Sbjct 783 SLDYAAVTPTWATYNSKEKGFDPEQTRVVRKNAR 816
Lambda K H
0.321 0.136 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 121909235772
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40