bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0723_orf3 Length=135 Score E Sequences producing significant alignments: (Bits) Value 5478.CAGL0M05775g 149 2e-35 > 5478.CAGL0M05775g Length=181 Score = 149 bits (376), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 71/133 (53%), Positives = 94/133 (70%), Gaps = 1/133 (0%) Query 2 PEKLLKAAGCVPRKNLLSVGQCIGKITKGRKFRLGITALHVIAKYAPHKVWLNPGGEQAF 61 PE + K A V R+NL+SVG C+GK TK KFRL ITAL V+AK+A +K+W+ P GE F Sbjct 48 PEYIAKLATSVARQNLMSVGICLGKFTKTGKFRLHITALSVLAKHAKYKIWIKPNGEMPF 107 Query 62 VYGNHIIKRHVGRLTADMPSGAGVCVLSLNGDLPLGFGTSAKATAEIHTAFTEAVSFYHH 121 +YGNH++K HVG++T D+P AG+ V S+N D+PLGFG SAK+T E A+ + Sbjct 108 LYGNHVLKAHVGKMTDDIPEHAGLIVFSMN-DMPLGFGVSAKSTLESKNLQPTAIVAFRQ 166 Query 122 ADVGEYLREEADL 134 AD+GEYLR+E L Sbjct 167 ADIGEYLRDEDTL 179 Lambda K H 0.321 0.138 0.426 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22597853330 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40