bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_0713_orf4
Length=296
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd4_1520 202 9e-51
> 5807.cgd4_1520
Length=353
Score = 202 bits (515), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 110/246 (44%), Positives = 158/246 (64%), Gaps = 25/246 (10%)
Query 43 SQTKWEKKEKLQSIAELCQLRSCNSVLYLEQRKNDAL-LHVAKVPLGPTFIARLMNVETL 101
S+ KWEKK+ I+E+ +LRSCN+++ LE R+++ L + VAK P GP+ +++N+ TL
Sbjct 98 SEVKWEKKQPFSEISEMSELRSCNNIILLEARRHEELYMWVAKCPNGPSIKFQILNIHTL 157
Query 102 SELRLSGNCLLHSRPLLIFGSEFDRDPH----------------YRVLKELFVQVFGTPR 145
ELRL+GN LL SRPLL F S F+ D + +++K+LF+QVFGTPR
Sbjct 158 GELRLAGNSLLGSRPLLSFDSAFESDNYVHNINFSQEQKHLKLPLKLIKDLFIQVFGTPR 217
Query 146 NHPKSKPFFDHAMSFFVSDNRIWFRHYQIAPLVVGEGGDANNPHRQTFIEIGPRFVLDPV 205
HPKSKPF DH +SF D +IWFRHYQIAP D NN +Q IEIGPRFVL+P+
Sbjct 218 YHPKSKPFHDHVISFNFLDGKIWFRHYQIAPTT---ERDHNNVDKQVLIEIGPRFVLEPI 274
Query 206 KILDGSFCGKSLWRNTEFVRTLDLLRPRRLQA-AIAFARRQGQKEKRKLYEEAV---LKD 261
ILDG+F G+ L+RN ++ ++ LLR Q + ++ +R K+KR Y++ + L +
Sbjct 275 LILDGTFSGQVLYRNPDY-KSPTLLRNIIKQGYSSSYLQRVQSKQKRSDYKDDLDSSLMN 333
Query 262 APKSKI 267
P+ K+
Sbjct 334 VPEKKM 339
Lambda K H
0.322 0.137 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 101413109161
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40