bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0686_orf1 Length=346 Score E Sequences producing significant alignments: (Bits) Value 5833.PFI0895c 281 3e-74 > 5833.PFI0895c Length=320 Score = 281 bits (718), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 136/311 (43%), Positives = 206/311 (66%), Gaps = 12/311 (3%) Query 34 VPKNFDLLPFPSLRVRLHPVPLMTILDAYIRRDEGQENVIGTLLGSCSDGNIIDVTDCFV 93 +P++FD+LP +++ +HP + TILDAY+RRDE Q +VIGTL+GS D N+++++DCFV Sbjct 19 IPQHFDILPHTTIKCIIHPSVIFTILDAYLRRDEDQTHVIGTLMGSVIDTNLVEISDCFV 78 Query 94 DRHSLTGEGLLQIIKDHHESMFELKQQANGGNGGVREVVVGWFCTGSEMTELTCAVHGWF 153 D+HSL G LQIIKDHHE+M+ELKQ+ R+ VVGWFC+GSE++EL+CAVHGWF Sbjct 79 DKHSLNEGGFLQIIKDHHETMYELKQKIRP-----RDQVVGWFCSGSELSELSCAVHGWF 133 Query 154 KQFSSVSKFFPQPPLTEPIHLMVDAVMESGSFSVKVYTQVQMTMAREACFQFHELPLELY 213 K+ +S+SKF+P PL EPIHL+VDA +ESG ++K Y Q+ +++ ++ FHE+ EL Sbjct 134 KEHNSISKFYPHTPLNEPIHLLVDASLESGFLNIKAYVQLPISLVKDYFVHFHEIQTELL 193 Query 214 ATPSDRVGLQLLQKVRTAHRSHPPRAEDLTEPASEGVLLDDITDGLNAELEQLQEKLEIC 273 +R + L++ AH+ D E ++ D L++L L+ C Sbjct 194 PCNVERADVSLVKGNIHAHK-------DNHTNNLEHNHNNNQIDMNELSLKKLLIMLKQC 246 Query 274 AAYVRRVLNGEVEPDPEVGRFLSSALSGATEPDLEAFEQLCQNTLQDSLMAAHLARLAKL 333 +YV+ V++ + + + VGR+L LS T LE F+ + ++ LQD+LM ++L+ LA L Sbjct 247 KSYVQDVIDQKKKGNISVGRYLHKVLSNDTFLTLEKFDSINESVLQDNLMISYLSNLANL 306 Query 334 QFAVAQKLNTS 344 QF +A+KLN+S Sbjct 307 QFLIAEKLNSS 317 Lambda K H 0.321 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 129139090689 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40