bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0682_orf1 Length=430 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd4_4340 291 3e-77 > 5807.cgd4_4340 Length=503 Score = 291 bits (745), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 174/488 (35%), Positives = 244/488 (50%), Gaps = 93/488 (19%) Query 1 LFSNPTSGGNKASAFTRTAVSQLTLTEPCPLKVFIHDIREGPSGSKPGFLLLRSVAAAAA 60 LF NPTSGGNKAS FT++ + ++ P V I+DIR+G +G K GFL ++ A + Sbjct 24 LFVNPTSGGNKASVFTKSGMDMFRISNPVSASVHIYDIRQGETGKKEGFLKVKETANSMG 83 Query 61 AAAAAAAGEPRAAADGSSSSKKAQHPIVRVLVAGGDGTVMWCIDEMHKTGVQPHVCAVGV 120 + + ++ AGGDGTVMWC+DE+ KT V +GV Sbjct 84 DNSIP----------------------LYIIAAGGDGTVMWCVDELEKTSVDFDKLVIGV 121 Query 121 VPYGTGNDFANAFGWRPFNAANPFDASLHTLRNIVEHCMRATVVYHDLWSVKVTLKPGGH 180 +P+GTGNDF+ A W NPFD LH R ++ + A ++ HD+WSVK + G Sbjct 122 IPFGTGNDFSRALNWMTI-LDNPFDNGLHRFRQLISDWINADIIEHDIWSVKAVVDSYGC 180 Query 181 FNRINSTTRKKEVVEAEGEP--------------------VKELSFTMSNYFSMGVESRI 220 F +++S +RKK+VV +G EL+F MSNYFS+GVESRI Sbjct 181 FYKVDSYSRKKKVVNKQGRANARQSNHEFSRGIDRGSNTIATELTFRMSNYFSVGVESRI 240 Query 221 GRGFDRYRTKSQVFNKMRYGIEGFKKTFVTRTKSINEIILDLRIHPN---------TPEE 271 G GFDRYRTK+ V NKMRY +EG K TF T + +II ++ E Sbjct 241 GIGFDRYRTKNAVLNKMRYALEGVKNTF-RHTTPVYDIIDKCTVNTTCNKEDSDLIVSSE 299 Query 272 QTLFTTDKAAA-KAQQL-----------------------------------PLLNKTAS 295 + LF TD+ A K+ P L AS Sbjct 300 KVLFVTDQNAKFKSNSCTCSKGGYEFVDTQNSISEHNRQSTGHYQNSVENPSPTLMPCAS 359 Query 296 LVVLNIPSFSGGNDIWAPSKKLATRMFDKQKRKQNKELLKVPQQMGDEKLEFMTFKNIPS 355 L+ +NIPSF+ GNDIW K F K +R + +L Q+MGDE +E ++F + + Sbjct 360 LIFINIPSFASGNDIWRYCKGNCGIKF-KSRRDSIENMLFEQQKMGDEIIECVSFPSAVA 418 Query 356 LGMEFMLHGRGCRLHSGKGPWQISFR---SLDEKTRVYFQTDGEYYQLTLPASVFVSHNR 412 +G+E + G G R+ KGP ++ F+ SL +VYFQ DGE+ P VSH+R Sbjct 419 IGLEIAIKGMGRRVFQNKGPVRLHFKQKNSLATGRKVYFQVDGEFLIAYHPLYFDVSHSR 478 Query 413 RVRVLSLK 420 +++VL K Sbjct 479 KIKVLQGK 486 Lambda K H 0.319 0.133 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 176453195035 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40