bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_0676_orf2
Length=152
Score E
Sequences producing significant alignments: (Bits) Value
5085.AFUA_1G04040 243 1e-63
> 5085.AFUA_1G04040
Length=142
Score = 243 bits (621), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 121/135 (89%), Positives = 127/135 (94%), Gaps = 1/135 (0%)
Query 17 FFGKFSKMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLDDG 76
FF F+ +QIFVKTLTGKTITLDVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQL+DG
Sbjct 9 FFCNFT-VQIFVKTLTGKTITLDVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDG 67
Query 77 RTLSDYNIQKESTLHLVLRLRGGIIEPSLALLASKYNCEKKICRKCYARLPPRATNCRKK 136
RTLSDYNIQKESTLHLVLRLRGGIIEPSL LASKYNCEK ICRKCYARLPPRATNCRKK
Sbjct 68 RTLSDYNIQKESTLHLVLRLRGGIIEPSLKALASKYNCEKSICRKCYARLPPRATNCRKK 127
Query 137 KCGHTSQLRPKKKPK 151
KCGH++QLRPKKK K
Sbjct 128 KCGHSNQLRPKKKLK 142
Lambda K H
0.322 0.139 0.441
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22586169780
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40