bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0642_orf2 Length=416 Score E Sequences producing significant alignments: (Bits) Value 5833.PF11_0122 243 7e-63 > 5833.PF11_0122 Length=779 Score = 243 bits (621), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 119/315 (37%), Positives = 181/315 (57%), Gaps = 6/315 (1%) Query 71 WLLPGYDVYVVSLQETLGQSIFETVTVYLSTVNGTSFKRIKFSEDKLSGLGDGAWMQFKS 130 W+ P YD+YV+ LQE++ +I +++YL +N ++ + ++ KLSG GDGA++Q KS Sbjct 424 WIQPYYDIYVICLQESISDNIINCLSMYLKEINQETYLFLPLADYKLSGYGDGAFLQMKS 483 Query 131 TCPGG-RSKEDLEGEGKPVSFVSSKAASVSFLSGSKGGVSVCLKIWGQLFCFIGCHMPST 189 T K L G PV +SK+ + + L+ SKG VS+ L I+ Q FIGCHMP+ Sbjct 484 TTIAAWVRKSKLHPRG-PVKLCASKSIAFNKLNNSKGCVSILLNIFNQFVLFIGCHMPAK 542 Query 190 SPEDRRKARAVVEQRLLEFYGG--ASSWAEAFHHVLWMGDFNFRTQRVTVQRAVSLLK-Q 246 E R+K+R + +L E++ S++ + FHHV+WMGDFNFR + +++ + LK Sbjct 543 DQEIRQKSREFILTKLSEYFSNKSTSNFKDVFHHVIWMGDFNFRVHGIHIEKVIHYLKTD 602 Query 247 SPTGLFAFDEWVGTNGDDMRSAGFVEAPVVFPPTYKKADGRPPANLSEPKWVEAEYQTHM 306 + L DE D+ S F E P+ F PTYKK RP N S+ +WV+ EY+ Sbjct 603 NLKELLKHDEGHSAYSYDL-SISFQELPINFLPTYKKNGNRPIINRSDTEWVQKEYKLIH 661 Query 307 ITQWYKGARHQDRIPSWTDRVFKCSLAEVSSLLRFQPDMYFCAMPSRPSFLIASDHSPVG 366 +WYKG + + RIPSWTDR+FK S + + L F P+ Y +P S +++SDH+PV Sbjct 662 NIKWYKGGKQETRIPSWTDRIFKWSCEKTKNCLVFVPNSYLSPIPEEKSIIMSSDHNPVS 721 Query 367 LGLECFPLDFAYALP 381 + F + +P Sbjct 722 CCFQMFKMKNDEDIP 736 Lambda K H 0.318 0.133 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 168191172525 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40