bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0598_orf1 Length=143 Score E Sequences producing significant alignments: (Bits) Value 5833.PF14_0128 150 1e-35 > 5833.PF14_0128 Length=299 Score = 150 bits (378), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 63/117 (53%), Positives = 87/117 (74%), Gaps = 1/117 (0%) Query 27 RWLVAIEGAPDTAYANDPFLLSFKFFPKYPIDSPELVFVAPFVPVHPHVYSNGHICLSIL 86 +W++ I GA +T Y+N+ F + FKF KYPI+SPE++F+ P+HPH+YSNGHICLSIL Sbjct 184 KWIIQITGAENTLYSNETFQMQFKFTEKYPIESPEVIFLGQ-PPIHPHIYSNGHICLSIL 242 Query 87 YDQWSPALGVKACCISLLSMLSSNREKQPPVDDRVYCDSRGLRGPKGVKWHFHDDTV 143 YD WSP L V + C+S++SMLSS ++K+ P+DD +YC + PK +KW FHDD V Sbjct 243 YDHWSPVLSVNSICLSIISMLSSCKKKRKPLDDILYCSTGPRISPKNMKWMFHDDKV 299 Lambda K H 0.324 0.140 0.458 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22654093455 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40