bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0586_orf2 Length=215 Score E Sequences producing significant alignments: (Bits) Value 5833.PF14_0530 224 2e-57 > 5833.PF14_0530 Length=1904 Score = 224 bits (570), Expect = 2e-57, Method: Composition-based stats. Identities = 94/201 (46%), Positives = 140/201 (69%), Gaps = 1/201 (0%) Query 14 ETVDAVLRCTMDCTKYQGPQPLLQSTDVHYYSKTGTAIFNWRVVYSRVAAPVNSCILQIS 73 +T+D + +DC Y G P +QSTDVHY KTGTAIFNWR+VY + P+N+C LQ++ Sbjct 1703 KTMDLTVTSELDCITYNGKNPTMQSTDVHYNCKTGTAIFNWRIVYPNITHPLNTCFLQLA 1762 Query 74 AYDFRNIGESPFIGEVNLEVRKYLERVAQTMASIEVDAELRLQNRAQETVDVQTF-GYVQ 132 AY+ N+G S F+GEVNLE+ KY+++ +Q + E+DAEL+L+ + + T+ GY+Q Sbjct 1763 AYNNNNVGVSEFLGEVNLELSKYIQKASQILNKFELDAELKLRKKTDTDHNKNTYNGYIQ 1822 Query 133 VTLQFMAQSEATSRPVGLGREPPNRDPRLTTPQEGRKWEDVLGSAGLRVDYRPIWYWVRV 192 VT+QF+ Q++A +PVGLGR+ PNR+P L TP GR+W D + S G Y+P W +++ Sbjct 1823 VTVQFIPQNKANIKPVGLGRDEPNRNPYLKTPDSGREWNDFMYSIGFNDIYKPFWNSLKL 1882 Query 193 VFIVFLSLWLFVIAFLYPALF 213 FI L +W+FV++F+YP+L Sbjct 1883 AFICLLVIWVFVLSFVYPSLL 1903 Lambda K H 0.324 0.138 0.428 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 56120981916 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40