bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0576_orf3 Length=268 Score E Sequences producing significant alignments: (Bits) Value 197221.tll0790 164 3e-39 > 197221.tll0790 Length=375 Score = 164 bits (415), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 97/257 (37%), Positives = 135/257 (52%), Gaps = 8/257 (3%) Query 8 FAAAAAAGRRHTQGSQQGLDVEAHVTLSFVDAALNGACSLPVIVRRQETCTACAG----P 63 F R QG +G D+ + L F +A G + + ETC C G P Sbjct 100 FFGGFTTSSRRQQGPTRGEDLRYDLKLEFREAVFGGEKE--IRINHLETCKTCQGTGAKP 157 Query 64 STRRTSPCPVCEGQGMQTETRRSSFGFVTTSVTCSACNATGISQGPLCKSCEGEGLISKD 123 TR + C C G G + R+ FG T TC C +G+ C+SC G+G I Sbjct 158 GTRPVT-CSTCGGVGQVRRSARTPFGSFTQLTTCPTCGGSGVVIEDRCESCGGQGHIQVS 216 Query 124 VHLKVNIPAGVLEGSLLRVEGEGSEGRNGEARGDLYISIGVESHDRLTREGADVCSEESI 183 LK+ IPAGV G+ LRV GEG G G GDLY+ + V+ REG ++ S I Sbjct 217 KKLKITIPAGVDNGTRLRVSGEGDAGLRGGPPGDLYVYLFVQPDPEFQREGNNILSRIKI 276 Query 184 SLEDAVYGCSITVHTVDGDVELKIPALSRSGRKFLIKGRGAKKIDDPSGARGDHVVTLRV 243 S A+ GC I+V TVDG+ ELKIPA ++ G +++GRG ++ +P ARGDH++T+ V Sbjct 277 SYLQAILGCRISVSTVDGEAELKIPAGTQPGTVLVLEGRGVPRVGNPV-ARGDHLITVDV 335 Query 244 ALPETATAKDRELLKSL 260 +P T ++RELL+ L Sbjct 336 EIPTHITHEERELLEKL 352 Lambda K H 0.314 0.131 0.378 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 85563639990 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40