bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Eten_0527_orf3
Length=317
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5833.PFE0930w                                                        145    1e-33


> 5833.PFE0930w
Length=1276

 Score =  145 bits (366),  Expect = 1e-33, Method: Composition-based stats.
 Identities = 75/250 (30%), Positives = 127/250 (50%), Gaps = 5/250 (2%)

Query  37    ATAFLDWDSTGKLLAAGGEAAFIEAW--EEGRRIGDYCPHGGSIVALQWVPGSRRLISMA  94
               +++ W    K L +G   + I  W  +  +R      H G I ++ W      ++S A
Sbjct  995   GVSYIIWSHNSKYLVSGSNDSNIIIWSPKSNKRKLSLNMHSGPITSICWSKDDSIIVSSA  1054

Query  95    TDRTMTLVSLEESSLTPTHVVEYEWILPGRPQEGFLLPRGNSVMIFFADRQIKLFDLVTK  154
              D+ +    L E     +  + Y W    R Q          +++  +D+ +++ D   K
Sbjct  1055  FDKKIFCTKLNEE--LKSFSILYAWSFSTRIQNFVFTNNDQYLIVVASDKNVRVIDYNQK  1112

Query  155   EETFWASEKDLVIAACPSKICNQILISAATTPPVLRLWDLDERKIVQKYKGHKVGRLAIR  214
             +E +   E D + + C SK+ N IL++ A   P ++LWD+  R I+Q Y+GHK GR  + 
Sbjct  1113  KELYILPEFDTITSVCASKLYNHILVNIADQKPTIKLWDVKYRYIIQTYRGHKQGRFIVH  1172

Query  215   PAFGGPREELVISGSEDAQIYIWHRVWGCMLQQLRGHAAAVNQVAW-VNFCNPVCLLSAG  273
               FGG  E+ VISGSED+ IYIWH+  G +L  + GHA+ V+   W +++     ++SA 
Sbjct  1173  STFGGKNEDYVISGSEDSLIYIWHKTKGYLLDVINGHASTVSIAIWPLSYSKFPYMISAS  1232

Query  274   DDGVLLLWSL  283
             DD  L++W++
Sbjct  1233  DDHTLMIWNV  1242



Lambda     K      H
   0.319    0.135    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 112945321377


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40