bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0526_orf2 Length=153 Score E Sequences producing significant alignments: (Bits) Value 5833.PF14_0723 69.7 3e-11 > 5833.PF14_0723 Length=1620 Score = 69.7 bits (169), Expect = 3e-11, Method: Composition-based stats. Identities = 39/107 (36%), Positives = 54/107 (50%), Gaps = 10/107 (9%) Query 4 LLGPVRTCLKEKKTSFEKLSAFRAEIGDAERAAALVEEQLLSVHPNP------AVRPMPG 57 LL + TCL+EKKT E+L + + D +L L SV+ N + +PG Sbjct 498 LLPNIETCLEEKKTYDEELKESKEKANDLNNKLSL----LTSVNVNTLDSDILKLGILPG 553 Query 58 LQRQHPVQDCYTIKSKFNFATSGFYWASPPCAPKPLRVFCDLSSGAT 104 P DC IK+ SGFYW P C+P+PLRV+CD+ S + Sbjct 554 DSYNFPANDCAVIKNVQENPLSGFYWIKPKCSPEPLRVYCDMDSSTS 600 Lambda K H 0.324 0.136 0.424 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23213563385 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40