bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0511_orf5 Length=320 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd2_1910 182 1e-44 > 5807.cgd2_1910 Length=534 Score = 182 bits (462), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 92/209 (44%), Positives = 121/209 (57%), Gaps = 3/209 (1%) Query 90 VAMKNGVTYRGEWRNGKQHGRGEQRQAQGVVYTGQFNQGQIDGFGRLTRSDGSKYEGEFV 149 V +++ +TY GEW +HG G Q+ G V+ G F G +G+G +DG KYEGE+ Sbjct 31 VELQDKITYEGEWLGDNKHGYGIQKWPDGAVFEGNFVNGTANGYGVFIHTDGDKYEGEWQ 90 Query 150 KGKAETRTRPGVYTFPDGSKYVGHWKQDKRDGEGCETLADGSKYRGQFADGLKSGKGIMT 209 +A G YT DGSKYVG WK DK+ G E+ DGS + G +A GLK G G + Sbjct 91 NDRAHGH---GTYTHSDGSKYVGEWKNDKKHGRAIESWVDGSNFEGSYAYGLKQGFGKFS 147 Query 210 ASNGDVYEGQFQQGEMSGFGKYSWPDGRAYEGEWRASRMHGKGTFYFTDGRRYEGDFVDS 269 +G Y G F +++GFG Y W DGR Y G W + M G G F +TD R YEG +++ Sbjct 148 WHDGSKYIGNFDANQINGFGIYHWNDGRVYTGYWLKNHMFGYGKFDWTDHRCYEGQYIND 207 Query 270 KMQGEGCLTWPDGSCFKGQFKNGLPHGEG 298 K G+G TWPDG + GQ+KNG HG G Sbjct 208 KKDGDGKFTWPDGRAYIGQWKNGKQHGIG 236 Lambda K H 0.311 0.133 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 114738104256 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40