bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_0473_orf3
Length=500
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF14_0699 202 2e-50
> 5833.PF14_0699
Length=592
Score = 202 bits (515), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 107/323 (33%), Positives = 172/323 (53%), Gaps = 44/323 (13%)
Query 7 RTYPERQIFNRDLTRRSLQRVLFAWAKSNTDVSYKQGMNEVLAVLYLACAREAI-PSSPL 65
RTY E++IF + R L +LF WAK N D+SYKQGMNE+LA+ ++ RE + ++
Sbjct 165 RTYSEKKIFQNEEIREILNTILFIWAKKNPDISYKQGMNEILAIFFIVNYREHLHNNNNY 224
Query 66 GDTDSA-----FSVIFSADPAHIEADAFRLFDGLMTGCCLRSMYLPPQKEPAPAEVKDSL 120
+ + FS +F D IEAD + +FD M L+ ++ + E K+S
Sbjct 225 YEYEKELFFKEFSNLF--DKEFIEADTYIIFDHFM-NMGLKYLF------TSMEEKKNST 275
Query 121 LGPLGGGPPMHSRATGQSAVLLRCSRVFNSLLAKADPAVYLHLEGLGVEPQLFLLRWLRL 180
++ T ++ +L +C+ +F+ LL +D +Y HL L +EPQ+FLLRW+RL
Sbjct 276 -----------NKNTCKTVLLHKCTYIFHKLLKNSDKLLYNHLISLSIEPQIFLLRWIRL 324
Query 181 LFSREFHVEDTLLIWDALFSDSWLSTKQQATPASSPVAAPPAVAAKSTVPARTPQ-EFAT 239
+ REF ++DT+++WD F+DS+L + V + E A
Sbjct 325 FYCREFPIDDTVILWDNFFADSYLKN----------------CNEQFNVDFKGDNIEIAH 368
Query 240 AASERLPLVDYFAVAMLKFIRQHLLESDLSSCLRRLLKFPPIESVQCIVALSLAVR-RGG 298
P+VDYFA++M+ FIR LLESD + CL+RL K+PP+E+++ ++ LS ++ R
Sbjct 369 MICRIFPMVDYFAISMILFIRSFLLESDENHCLKRLFKYPPVENIKILIDLSFKIKHRNE 428
Query 299 TPTSAVAAGDPRSSSSSNSSRKS 321
+P ++N S+K
Sbjct 429 KKEKHTKKEEPHIIHNNNLSKKE 451
Lambda K H
0.317 0.131 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 216259317552
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40