bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0458_orf4 Length=299 Score E Sequences producing significant alignments: (Bits) Value 5833.PF10_0264 347 3e-94 > 5833.PF10_0264 Length=263 Score = 347 bits (890), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 166/266 (62%), Positives = 203/266 (76%), Gaps = 13/266 (4%) Query 18 SAMEDTIAKMLICKVHIGTKNVEHKMRSYIYKVTREGVHLINLRKTYEKLQLAARVVAAV 77 S E++IAKMLICKVHIGTKN+E+KM+ Y+Y ++GVH+INL KTYEKLQLAAR++ A+ Sbjct 8 SPKEESIAKMLICKVHIGTKNLENKMKRYVYTRAKDGVHIINLAKTYEKLQLAARIIVAI 67 Query 78 EHPADVLVVSARPYGARASLKFAQYTGAQAAAARWTPGMLTNQITAKFREPRLIVATDPR 137 +PADV+VVSARP+G+RA LKFAQYTGAQA A RWTPGMLTNQI KF EPRL++ TDPR Sbjct 68 SNPADVVVVSARPFGSRAVLKFAQYTGAQAIAGRWTPGMLTNQIIQKFTEPRLLIVTDPR 127 Query 138 TDARAVKESSYANVPVIALCDTDSPLDFVDVAIPCNNKGLESIALMYWLLAREVLCLRGE 197 TDA++VKES+YAN+PVIALCD+DSPL+ VD+AIPCNNKG ESIALMYWLLA+EVL L+G Sbjct 128 TDAQSVKESAYANIPVIALCDSDSPLEHVDIAIPCNNKGKESIALMYWLLAQEVLYLKGV 187 Query 198 LSRSQPWDVMVDLFLWRDPEELDKRDKLEDREQPPHAHQESNNWATAAAADWGSKANEWT 257 + RS+PW+VMVD+FLWRDPE+ + ++ + P H N +A A D EWT Sbjct 188 IPRSEPWNVMVDMFLWRDPEQFELKNLANEENTPTAPHLIENQYAAEAPYD------EWT 241 Query 258 GPGTAAAAEWNDAAAAPADWGAPAAA 283 EWND DW P AA Sbjct 242 -----KKEEWNDNTN--EDWKNPIAA 260 Lambda K H 0.317 0.127 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 103213341868 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40