bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0431_orf2 Length=239 Score E Sequences producing significant alignments: (Bits) Value 5833.PF14_0493 310 2e-83 > 5833.PF14_0493 Length=895 Score = 310 bits (795), Expect = 2e-83, Method: Composition-based stats. Identities = 145/237 (61%), Positives = 171/237 (72%), Gaps = 21/237 (8%) Query 3 DHFNTYLSRDGGLTWIEAHKGAFIYEMGDHGGLLVMADDTKKTNQVVFSWNEGQSWYDFE 62 D NT+LSRDGG+TWIEAHKG +IYE GD+GGL+VMADD +KTNQ+VFSWNEGQSW+DFE Sbjct 529 DEVNTFLSRDGGVTWIEAHKGPYIYEYGDYGGLIVMADDLRKTNQIVFSWNEGQSWFDFE 588 Query 63 LGSAPLFVDNIVIEPNSSSVEFLLYGKRENDNAGVLFHLDFAALNQQRCKGIWAADSVSS 122 LG + VDNIV EPNS+SVEFL+YG R ++ GVL+HLDF AL Q CKG+WAADSVSS Sbjct 589 LGQFSIDVDNIVAEPNSASVEFLVYGTR--NDVGVLYHLDFNALGQPLCKGLWAADSVSS 646 Query 123 DYETWSPSDGRSGEKCILGKHVTYTRRKQTSECFNGRDFERPRSVQVCPCTIQDYECEYG 182 DYETWSP+ G +KCILG+ +TYTRRKQTSECFNG+D +R + C CT +DYECE G Sbjct 647 DYETWSPTSGNFNDKCILGRKITYTRRKQTSECFNGKDLKRTVDKKPCECTPEDYECETG 706 Query 183 FERAVGSVYCLPTDVAAAAASTAAGLNQYADEADAAAAAACTSSAFFYTAAYRKVPG 239 F R +GS C P D CTSS++FY AYRKVPG Sbjct 707 FTRKIGSYECKPND-------------------PTLTIEGCTSSSYFYANAYRKVPG 744 Lambda K H 0.318 0.133 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 69865650655 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40