bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_0409_orf3
Length=106
Score E
Sequences producing significant alignments: (Bits) Value
10141.ENSCPOP00000014220 194 5e-49
> 10141.ENSCPOP00000014220
Length=379
Score = 194 bits (494), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 92/106 (86%), Positives = 100/106 (94%), Gaps = 0/106 (0%)
Query 1 GGFSVDKATLTRFFAFHFILPFIIIAIAIVHLLFLHETGSNNPTGISSDVDKIPFHPYYT 60
GGFSVDKATLTRFFAFHFILPFII A+ +VHLLFLHETGSNNP+G++SD DKIPFHPYYT
Sbjct 166 GGFSVDKATLTRFFAFHFILPFIITALVMVHLLFLHETGSNNPSGLNSDSDKIPFHPYYT 225
Query 61 IKDILGALLLILALILLVLFAPDLLGDPDNYTPANPLNTPPHIKPE 106
IKDILGAL ++LAL+ LVLF PDLLGDPDNYTPANPLNTPPHIKPE
Sbjct 226 IKDILGALFMMLALLCLVLFTPDLLGDPDNYTPANPLNTPPHIKPE 271
Lambda K H
0.327 0.149 0.457
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22605445551
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40