bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0409_orf3 Length=106 Score E Sequences producing significant alignments: (Bits) Value 10141.ENSCPOP00000014220 194 5e-49 > 10141.ENSCPOP00000014220 Length=379 Score = 194 bits (494), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 92/106 (86%), Positives = 100/106 (94%), Gaps = 0/106 (0%) Query 1 GGFSVDKATLTRFFAFHFILPFIIIAIAIVHLLFLHETGSNNPTGISSDVDKIPFHPYYT 60 GGFSVDKATLTRFFAFHFILPFII A+ +VHLLFLHETGSNNP+G++SD DKIPFHPYYT Sbjct 166 GGFSVDKATLTRFFAFHFILPFIITALVMVHLLFLHETGSNNPSGLNSDSDKIPFHPYYT 225 Query 61 IKDILGALLLILALILLVLFAPDLLGDPDNYTPANPLNTPPHIKPE 106 IKDILGAL ++LAL+ LVLF PDLLGDPDNYTPANPLNTPPHIKPE Sbjct 226 IKDILGALFMMLALLCLVLFTPDLLGDPDNYTPANPLNTPPHIKPE 271 Lambda K H 0.327 0.149 0.457 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22605445551 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40