bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0385_orf1 Length=218 Score E Sequences producing significant alignments: (Bits) Value 376686.Fjoh_0533 277 2e-73 > 376686.Fjoh_0533 Length=334 Score = 277 bits (708), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 132/199 (66%), Positives = 165/199 (82%), Gaps = 7/199 (3%) Query 25 LGEFIIANKDKLKKKGSEAEMNKLLTAIKLAAKVVNREINMAGLVDILGAAGNQNVQGED 84 LGEFII N+ + S E+++++ +I+LAAKVVN ++N AGLVDI+GAAG QN+QGED Sbjct 8 LGEFIIENQKAFQY--SSGELSRIINSIRLAAKVVNYKVNKAGLVDIIGAAGEQNIQGED 65 Query 85 QQKLDVFANKKFIQALVNREVVCGICTEEDDDFIPV--NPNCH---LVLLMDPLDGSSNI 139 QQKLDV+AN+ FIQ L+NRE+VCGI +EE+DDFI V + NCH V+LMDPLDGSSNI Sbjct 66 QQKLDVYANEVFIQTLINREIVCGIASEENDDFITVQGSDNCHNNKYVILMDPLDGSSNI 125 Query 140 DVNVSVGTIFSIFQRVSPVGQPVERRDFLQPGKEQLAAGYVLYGSSTMLVMTTGSGVNGF 199 DVNVSVGTIFS+F+R++P+G PV DFLQPG Q+AAGYV+YG+STMLV TTG GVNGF Sbjct 126 DVNVSVGTIFSVFRRITPIGTPVTSEDFLQPGINQVAAGYVIYGTSTMLVYTTGFGVNGF 185 Query 200 TLDSSLGTFFLSHPNMHFP 218 TL+ ++GTF+LSHPNM FP Sbjct 186 TLNPAIGTFYLSHPNMKFP 204 Lambda K H 0.318 0.136 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 57951013935 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40