bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0378_orf2 Length=174 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd5_2630 91.7 8e-18 > 5807.cgd5_2630 Length=268 Score = 91.7 bits (226), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 20/176 (11%) Query 18 VYCVVRNHRRGGCRETQEALKALGLPRPYSCTLIANDENATKILRKVSPFVFYGLPSAET 77 + VVRN R G E+ L+ LGL +S ++++ + ++LR+V P+VFYG P+ Sbjct 92 IVLVVRNSRFCGSLESNRKLRDLGLVNKFSAVILSHTDETIRVLREVKPYVFYGFPNLNL 151 Query 78 IRRLFVTRARLT--------------SEEGVAPVALSDNMMVEEAFGSLGLFCVEDLVH- 122 ++ L + T SE+ V L+DN +VE+ G +G+ C ED+V Sbjct 152 LKTLVFKKGAFTHQNVQSKGQSRAKLSEKKQGKVLLTDNNIVEDRLGEIGVLCTEDIVTG 211 Query 123 -----EVVTCGPHFPQVMQRVGHFQLESLKQVEELEAKRMEYGYIRNKIDMKVAQL 173 E F + + FQL +LK+ E +AK+ E G++ I+ K++++ Sbjct 212 LWNGCETQQDKEIFEAITSNLAPFQLCNLKRAEGFDAKKFESGFLGKSINEKISKI 267 Lambda K H 0.322 0.137 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 34096907735 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40