bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0367_orf2 Length=412 Score E Sequences producing significant alignments: (Bits) Value 44689.DDBDRAFT_0185520 61.2 6e-08 > 44689.DDBDRAFT_0185520 Length=430 Score = 61.2 bits (147), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 74/313 (23%), Positives = 133/313 (42%), Gaps = 63/313 (20%) Query 118 AILPRNYVGTTSIGQAVAGLVAF---VVTAILMNGVFDMDKEIDVKWFCSICCGISVLLC 174 A+ P Y G G VAG++A ++T + + ++E + +F G +++C Sbjct 147 ALFPGEYTGAVMSGNGVAGMIAMALQIITKVSVPATAHGNQESGLIFF--FLAGGVLIIC 204 Query 175 V----------LSMLYMHFFLNAKVCVQ-SVNNALEGKSDAKTVPDDTPTSVADLEEPKV 223 + ++ Y+ F +K+ SVN G DAK + Sbjct 205 LLCFLVLLQLPITKYYLANFEASKLKENGSVNGIESGDGDAK-------------PKKSA 251 Query 224 RQSSGHASSQDESLLPPRPWLTMVKGSWWELLSLFLVFFITFSLFP---KVGPVSFNFEG 280 RQ G L ++K W E L +F VFF T S+FP ++ S + Sbjct 252 RQWMGEL-------------LNILKKVWREALVVFTVFFTTLSIFPGLTQLIQTSNEHQL 298 Query 281 KSPSKMVLLFGMEFVGDFLGRSCLTLPNLHPACSFLFLSRNGTIIASFLRLIFYVPFLMA 340 S +++ F + VGDF+GR T+P F+ + + I +FLRL F+ F + Sbjct 299 SSDWFIIVFFSIFMVGDFIGR---TVPKW-----FIIFTPSNLWIPTFLRLAFFPLFALC 350 Query 341 MKMENVPFI-NNFVWLMIIQLLLAFTLGWVGTLTLIHCSLSVTRVSEKARMGSVSTIVLA 399 +K P + NN W + + + + G+ GTL +I T+ E + + I+++ Sbjct 351 IK----PLVFNNNAWYFVFMFIFSISNGYCGTLAMI---FGPTKAEEHEK--EYAGIIMS 401 Query 400 VAIGIGLYIALAF 412 + G++++ F Sbjct 402 FFLNFGIWVSTHF 414 Lambda K H 0.329 0.142 0.442 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 165830594665 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40