bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_0361_orf2
Length=257
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd6_880 194 2e-48
> 5807.cgd6_880
Length=1891
Score = 194 bits (493), Expect = 2e-48, Method: Composition-based stats.
Identities = 84/137 (61%), Positives = 105/137 (76%), Gaps = 0/137 (0%)
Query 105 DPLLLHLALASLQCYGAVASAPLIWGSNDPSLAAGLPHFATGFMRNWGRDTFIAIRGILI 164
DPL +HL LA+ Q Y V S+PLIW S PS++AGLPHF+TGFMR+WGRDTFIA GILI
Sbjct 1380 DPLYIHLQLATYQVYSYVPSSPLIWNSKIPSISAGLPHFSTGFMRSWGRDTFIAFNGILI 1439
Query 165 ATGRYAEARREILGYARVLRHGLIPNLLDSGNNPRYNARDATWFFMQAIQDYCLAAPEGL 224
++ RY EA++EILG AR++RHGLIPNL+DSGN PRYNARDATWFF+ A DYC+ P G
Sbjct 1440 SSKRYLEAKQEILGVARLMRHGLIPNLIDSGNRPRYNARDATWFFLNAALDYCVNIPNGY 1499
Query 225 DFLLCPVEMKYGKNASQ 241
L +E+++ N +
Sbjct 1500 QILNEDIELRFTLNLEE 1516
Lambda K H
0.325 0.139 0.445
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 79865823972
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40