bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0341_orf2 Length=221 Score E Sequences producing significant alignments: (Bits) Value 7227.CG7430-PA 229 5e-59 > 7227.CG7430-PA Length=504 Score = 229 bits (584), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 121/221 (54%), Positives = 158/221 (71%), Gaps = 6/221 (2%) Query 2 VSALSQGIEGLFKRNKVDYLKGTGRLAGPHAVQVQPIDAGNPQMLMAKNVILATGSEPAP 61 V AL+ GI LFK+NKV L G G + P+ V+V+ D G+ + + KN+++ATGSE P Sbjct 127 VKALTGGIAMLFKKNKVTQLTGFGTIVNPNEVEVKKSD-GSTETVKTKNILIATGSEVTP 185 Query 62 LAGGALEVDEETIVSSTGALALPRVPKHLVVVGGGVIGLELGSVWRNLGAEVTVVEFCDK 121 G +E+DEE IVSSTGAL L +VPKHLVV+G GVIGLELGSVW LGAEVT +EF D Sbjct 186 FPG--IEIDEEVIVSSTGALKLAKVPKHLVVIGAGVIGLELGSVWSRLGAEVTAIEFMDT 243 Query 122 II-PALDAEIGRAFQKLLERQGIKFMFGTKVVGSQKADGGVTLSLENVKSGDASEVQCDV 180 I +D E+ + FQK+L +QG+KF GTKV + ++ VT+S+EN KSG+ E+QCD Sbjct 244 IGGVGIDNEVSKTFQKVLTKQGLKFKLGTKVTAASRSGDNVTVSVENAKSGEKEEIQCDA 303 Query 181 VLVAVGRRPYTKDLGLEELGINLDNRGRVGVNE--QMLVPN 219 +LV+VGRRPYT+ LGLE +GI D+RGR+ VN Q +VPN Sbjct 304 LLVSVGRRPYTEGLGLEAVGIVKDDRGRIPVNATFQTVVPN 344 Lambda K H 0.316 0.138 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 59781045954 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40