bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0339_orf4 Length=208 Score E Sequences producing significant alignments: (Bits) Value 5833.PF11_0071 254 2e-66 > 5833.PF11_0071 Length=475 Score = 254 bits (648), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 109/202 (53%), Positives = 159/202 (78%), Gaps = 0/202 (0%) Query 5 VGTDVLSMMGAYMKPRKTEITERLREEINKTVNKYIEQGVAQLIPGVLFIDEVHMLDIEC 64 VG D+ S++ +Y++P+KTEITE+LR EINKTVNK++E G+A++IPGVL+IDE HMLDIEC Sbjct 272 VGEDLASVLNSYLRPKKTEITEKLRVEINKTVNKFLESGLAEIIPGVLYIDEAHMLDIEC 331 Query 65 FSFLNRVLESPMSPIIVFATNRGVSTVRGTDSVEPPGMPVDFLDRLLIIKTQPYTVSEVV 124 FS+LNR +ESP++PI++ ATNRG+ TV+GTD++EP G+PVD LDRL+IIKT PYT+ E+V Sbjct 332 FSYLNRAIESPLAPILIMATNRGICTVKGTDNIEPHGIPVDLLDRLIIIKTFPYTLKEIV 391 Query 125 QVIQLRAAVERVNLSPSALEALGEIGGQISVRFALQLLEPCRLAAEARGSEVVEPNDVAD 184 Q++ LRA E++N++ + L +IG Q S+RFA+ LLEP R+ A G+ +++ + Sbjct 392 QILALRAQTEKINITEEGMNYLAKIGIQSSLRFAMLLLEPSRILATLEGNTIIDIKHIEQ 451 Query 185 VDSLYLDAKASPVRLAEQPHRF 206 D L++DAK S R+ +Q ++F Sbjct 452 ADELFMDAKTSAHRVVDQSNKF 473 Lambda K H 0.320 0.137 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 52674479614 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40