bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_0338_orf1
Length=106
Score E
Sequences producing significant alignments: (Bits) Value
5085.AFUA_1G06190 122 3e-27
> 5085.AFUA_1G06190
Length=352
Score = 122 bits (306), Expect = 3e-27, Method: Composition-based stats.
Identities = 51/102 (50%), Positives = 71/102 (69%), Gaps = 0/102 (0%)
Query 4 YSIQLRRKDFLHAFVAWFDVVFSKCHKPVILSTSPHNRYTHWKQTVFYMEHVLVGEVGDT 63
+S+ ++R DF+HA +AWFD+ F+ CHKP+ ST PH +YTHWKQTVFY+ VL E +
Sbjct 251 FSLPVKRSDFIHAIIAWFDIDFTACHKPISFSTGPHAKYTHWKQTVFYLRDVLTVEEEEC 310
Query 64 VKGLIAVKKNKKNPRDLDIKISYEFQNRHTLKPISNTQFYRL 105
V G++ K N KNPRDLDI+ISY+ + L+ + FYR+
Sbjct 311 VSGILENKPNDKNPRDLDIQISYKLETTDKLRYDEGSCFYRM 352
Lambda K H
0.326 0.138 0.435
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22605445551
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40