bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0336_orf2 Length=83 Score E Sequences producing significant alignments: (Bits) Value 5833.PF11_0314 137 7e-32 > 5833.PF11_0314 Length=439 Score = 137 bits (346), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 65/83 (78%), Positives = 75/83 (90%), Gaps = 1/83 (1%) Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60 NE++R RILQIH+RKM V+K DVNF ELARSTDDFNGAQLKAVCVEAGMIALRR A+E+ Sbjct 358 NEESRARILQIHSRKMNVHK-DVNFEELARSTDDFNGAQLKAVCVEAGMIALRRGATEID 416 Query 61 HEDFVQGIAAVQAKKKSSLNYFT 83 HEDFV+GI +V +KKKS+LNYFT Sbjct 417 HEDFVEGITSVLSKKKSTLNYFT 439 Lambda K H 0.318 0.129 0.346 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22659344793 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40