bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0319_orf2 Length=282 Score E Sequences producing significant alignments: (Bits) Value 4952.YALI0F24695g 267 3e-70 > 4952.YALI0F24695g Length=263 Score = 267 bits (682), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 137/254 (53%), Positives = 182/254 (71%), Gaps = 4/254 (1%) Query 25 KKLPSDPTSAKNAK-KTTKSLIFQKTPRNFRIGCSIQPRRELTRFVKWPKYVLLQRQRRV 83 KK+ P++AK +K + K+ +F+K +++ IG SIQP+R L+RFVKWP+YV LQRQ+++ Sbjct 9 KKVAPAPSAAKVSKTEDAKNPLFEKKAKSYGIGQSIQPKRNLSRFVKWPEYVRLQRQKKI 68 Query 84 LMQRLKVPPAINQFTHTLDKNQTGQLLRLLAKYKPETRGEKKARLIAEGEKQSSGA--QA 141 L RLKVPP++ QF++TLDKN Q +LL KY+PET+ EKK RL E E ++G + Sbjct 69 LSMRLKVPPSLAQFSNTLDKNTAAQTFKLLNKYRPETKEEKKERLTKEAEAIAAGKDKKD 128 Query 142 TSKKPVMLKFGLNHVTDLIEIKKAKLVVIAHDVVPIDLVCWLPALCRKKDVPYCIVKGKA 201 S+KP ++K+GLNHV L+E KKA LV+IA+DV PI+LV +LPALCRK VPY IVKGKA Sbjct 129 VSEKPYVVKYGLNHVVSLVENKKANLVLIANDVDPIELVVFLPALCRKMGVPYAIVKGKA 188 Query 202 RLGQLVHKKTCAVIAVDAVRKEDQAELEAQCKNYRAMFNDNSD-LRRRWGGGHLGIKSQH 260 RLG LVHKKT AV+A+ V+ EDQA L A FN+ D RR+WGGG LG K+ Sbjct 189 RLGTLVHKKTAAVVAITEVKSEDQATLATLVSTIEANFNEKYDESRRKWGGGILGRKALD 248 Query 261 AQEKKQKLIDAEMR 274 EKKQK +DA ++ Sbjct 249 KLEKKQKALDAVIK 262 Lambda K H 0.318 0.132 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 93999491820 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40