bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_0313_orf2
Length=222
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd7_220 389 3e-107
> 5807.cgd7_220
Length=212
Score = 389 bits (1000), Expect = 3e-107, Method: Compositional matrix adjust.
Identities = 180/212 (84%), Positives = 196/212 (92%), Gaps = 0/212 (0%)
Query 11 MTEQVPEFKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNV 70
M Q PEFKL LVGDGGVGKTTLVKRHLTGEFEKKYIPT+GVEV PL+F+T+FGP++FNV
Sbjct 1 MAAQAPEFKLALVGDGGVGKTTLVKRHLTGEFEKKYIPTIGVEVHPLKFNTDFGPLIFNV 60
Query 71 WDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIVRVCENIPIVLVGNK 130
WDTAGQEKFGGLRDGYYIKGQCAI+MFDVTSRITY+N+PNWHRDIVRVCENIPIVLVGNK
Sbjct 61 WDTAGQEKFGGLRDGYYIKGQCAIIMFDVTSRITYKNVPNWHRDIVRVCENIPIVLVGNK 120
Query 131 VDVKDRQVKARVIQFHRKKNLQYYDISARSNYNFEKPFLWLARRLTNQASLTFTGEHAKA 190
VDVKDRQVKAR IQ+HRK+NLQYYDISARSNYNFEKPFLWLARRLTNQ +L G+HAKA
Sbjct 121 VDVKDRQVKARQIQYHRKRNLQYYDISARSNYNFEKPFLWLARRLTNQPALQLVGQHAKA 180
Query 191 PEIMIDPSLVQQAERELQEAVNTAIEDDDDDL 222
PE+ IDP+LV QAEREL EA N IEDDD+DL
Sbjct 181 PEVNIDPTLVAQAERELSEAANAPIEDDDEDL 212
Lambda K H
0.321 0.139 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 60391056627
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40