bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_0293_orf3
Length=232
Score E
Sequences producing significant alignments: (Bits) Value
44689.DDBDRAFT_0185667 162 1e-38
> 44689.DDBDRAFT_0185667
Length=434
Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/225 (40%), Positives = 134/225 (59%), Gaps = 11/225 (4%)
Query 3 SLTKWASEDVMELVKTFVKIRFPFVLVLNKCDAGGDVDKNVLRLSSKFRDSPLVLTSALA 62
+L+ W +DV + V +F+ +RFP VL LNK D D N+ R+ SK+ D ++ TSALA
Sbjct 202 NLSVWTDDDVHKFVNSFLDVRFPTVLALNKVDQSTS-DLNISRICSKYPDYSMIPTSALA 260
Query 63 ECFLQKLQQQKMIAYDPCSGTAYCSEDLRGPGSSRLKEEQQQLIKSLKPIDPKAFHRLEK 122
ECFL+K++ Q I Y +D + +++ LK D K RLEK
Sbjct 261 ECFLRKMKSQGFIEYKEGDDNFKTYDDC---------SDNEKINTKLKQSDDKLKGRLEK 311
Query 123 VRDLMLFRHGGTGVAEALRVAVEVLGQRMAVYPVKTLQLSAVDKKGRGPFVECMLVKKGT 182
+RDL+LFR+G TG+ A++ AVE L + + VYPVK L+ + DK G +CMLV +GT
Sbjct 312 LRDLVLFRYGSTGIQTAIKEAVE-LKKFIPVYPVKNLKSLSCDKSGGSILRDCMLVPQGT 370
Query 183 TVGELAHLLHPAIARNFLFAELPDGRRVGENEVMTPESSIIRITT 227
V E A +LHP + + +L+AE G+R+GE + +T ++II+ TT
Sbjct 371 QVREFAGMLHPDLDKYYLYAEGITGQRLGETDEITLSNNIIKFTT 415
Lambda K H
0.320 0.136 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 65612958876
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40