bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0293_orf3 Length=232 Score E Sequences producing significant alignments: (Bits) Value 44689.DDBDRAFT_0185667 162 1e-38 > 44689.DDBDRAFT_0185667 Length=434 Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 90/225 (40%), Positives = 134/225 (59%), Gaps = 11/225 (4%) Query 3 SLTKWASEDVMELVKTFVKIRFPFVLVLNKCDAGGDVDKNVLRLSSKFRDSPLVLTSALA 62 +L+ W +DV + V +F+ +RFP VL LNK D D N+ R+ SK+ D ++ TSALA Sbjct 202 NLSVWTDDDVHKFVNSFLDVRFPTVLALNKVDQSTS-DLNISRICSKYPDYSMIPTSALA 260 Query 63 ECFLQKLQQQKMIAYDPCSGTAYCSEDLRGPGSSRLKEEQQQLIKSLKPIDPKAFHRLEK 122 ECFL+K++ Q I Y +D + +++ LK D K RLEK Sbjct 261 ECFLRKMKSQGFIEYKEGDDNFKTYDDC---------SDNEKINTKLKQSDDKLKGRLEK 311 Query 123 VRDLMLFRHGGTGVAEALRVAVEVLGQRMAVYPVKTLQLSAVDKKGRGPFVECMLVKKGT 182 +RDL+LFR+G TG+ A++ AVE L + + VYPVK L+ + DK G +CMLV +GT Sbjct 312 LRDLVLFRYGSTGIQTAIKEAVE-LKKFIPVYPVKNLKSLSCDKSGGSILRDCMLVPQGT 370 Query 183 TVGELAHLLHPAIARNFLFAELPDGRRVGENEVMTPESSIIRITT 227 V E A +LHP + + +L+AE G+R+GE + +T ++II+ TT Sbjct 371 QVREFAGMLHPDLDKYYLYAEGITGQRLGETDEITLSNNIIKFTT 415 Lambda K H 0.320 0.136 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 65612958876 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40