bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_0260_orf1
Length=261
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF13_0044 204 3e-51
> 5833.PF13_0044
Length=2375
Score = 204 bits (518), Expect = 3e-51, Method: Composition-based stats.
Identities = 83/141 (58%), Positives = 112/141 (79%), Gaps = 0/141 (0%)
Query 121 CYVVLGCGCYCIGSSVEFDWSAVSCISTLRSLGHKAIVVNCNPETVSTDYDVSDRLYFED 180
C++VLGCGCY IGSSVEFDWSA+ C+ T+R L HKAI++NCNPETVSTDYD SDRLYF++
Sbjct 1841 CFIVLGCGCYRIGSSVEFDWSAIHCVKTIRKLNHKAILINCNPETVSTDYDESDRLYFDE 1900
Query 181 LTLETVSTIWDLEQPRGMIISVGGQTANNLCSALQRRGVGIIGTNVSSIDCCEDRHKFSR 240
+T E + I++ E G+II+ GGQT+NNL +L + V I+G++ S+DCCE+R+KFS
Sbjct 1901 ITTEVIKFIYNFENSNGVIIAFGGQTSNNLVFSLYKNNVNILGSSAQSVDCCENRNKFSH 1960
Query 241 LCDELRLDQPGWSEFSSLEAA 261
LCD L++DQP W++F+ L A
Sbjct 1961 LCDSLKIDQPKWNKFTKLSKA 1981
Lambda K H
0.317 0.134 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 81345714075
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40