bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0260_orf1 Length=261 Score E Sequences producing significant alignments: (Bits) Value 5833.PF13_0044 204 3e-51 > 5833.PF13_0044 Length=2375 Score = 204 bits (518), Expect = 3e-51, Method: Composition-based stats. Identities = 83/141 (58%), Positives = 112/141 (79%), Gaps = 0/141 (0%) Query 121 CYVVLGCGCYCIGSSVEFDWSAVSCISTLRSLGHKAIVVNCNPETVSTDYDVSDRLYFED 180 C++VLGCGCY IGSSVEFDWSA+ C+ T+R L HKAI++NCNPETVSTDYD SDRLYF++ Sbjct 1841 CFIVLGCGCYRIGSSVEFDWSAIHCVKTIRKLNHKAILINCNPETVSTDYDESDRLYFDE 1900 Query 181 LTLETVSTIWDLEQPRGMIISVGGQTANNLCSALQRRGVGIIGTNVSSIDCCEDRHKFSR 240 +T E + I++ E G+II+ GGQT+NNL +L + V I+G++ S+DCCE+R+KFS Sbjct 1901 ITTEVIKFIYNFENSNGVIIAFGGQTSNNLVFSLYKNNVNILGSSAQSVDCCENRNKFSH 1960 Query 241 LCDELRLDQPGWSEFSSLEAA 261 LCD L++DQP W++F+ L A Sbjct 1961 LCDSLKIDQPKWNKFTKLSKA 1981 Lambda K H 0.317 0.134 0.402 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 81345714075 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40