bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0250_orf1 Length=258 Score E Sequences producing significant alignments: (Bits) Value 5833.MAL13P1.275 208 1e-52 > 5833.MAL13P1.275 Length=1288 Score = 208 bits (530), Expect = 1e-52, Method: Composition-based stats. Identities = 106/256 (41%), Positives = 157/256 (61%), Gaps = 33/256 (12%) Query 5 PLKTGSTKTGCSEVYKFELPCNRKVYYLKLRPGLRRFLKALAPVFELSIYTNATQEYADL 64 PL+ G +E+YKF LP YYLK RP +R+FL+ L+ +EL+IYTNAT+EYAD+ Sbjct 872 PLENFVDDNGEAELYKFYLPQYNFFYYLKFRPYVRQFLQILSLYYELAIYTNATREYADV 931 Query 65 VVAILDPDRSLFGDRIVARESSGRGEQTENKTVRCLYGDLDRRCVVAFDDRQNIWTDLPV 124 V+AILDPDR++F DRIVAR SS ++ ENK +Y ++D + V+AFDDR+++W D+P Sbjct 932 VIAILDPDRTIFSDRIVARCSS--TDRDENKYFSRIYPNVDPKYVIAFDDRKDVWIDIPQ 989 Query 125 SHVVKAQHYDFFDSSRPELLAHYPHLPLEETLAAIAENPRQRATALDRPSPVPAAMKHLN 184 SH++KA+HY+FF+ S+ ++++H+ P A K + Sbjct 990 SHILKAEHYNFFELSKYDIISHFKE-------------------------PTTARKKFV- 1023 Query 185 RPYDWDRHMQHMINIFLKVHQEFFKDPWNANVGTIISGFQSRVLAGVGLFLTGYRKSFA- 243 D D H+ +MI FLK+H+ FF++P +VG +I L+ VG++ TG+RK+ Sbjct 1024 ---DMDMHLHYMIKFFLKLHKNFFENPLETDVGKLIDKMMGSTLSNVGVYFTGFRKNSKN 1080 Query 244 -PGSLVADCEERQAEL 258 L ADCEERQ E+ Sbjct 1081 IQNVLSADCEERQKEI 1096 Lambda K H 0.322 0.137 0.421 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 80470868093 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40