bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0241_orf1 Length=126 Score E Sequences producing significant alignments: (Bits) Value 5833.PF13_0316 202 2e-51 > 5833.PF13_0316 Length=151 Score = 202 bits (515), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 95/126 (75%), Positives = 111/126 (88%), Gaps = 0/126 (0%) Query 1 LRVKPQEVEDHIVKLARKGQTPSQIGVTLRDQFGIPQVKSVTGSKILRILKKQGIAPEIP 60 L+ KP E+ED I+KLA+KGQTPSQIG TLRD +GIPQVKSVTG+KILRIL+ QGIA IP Sbjct 26 LKQKPSEIEDAIIKLAKKGQTPSQIGATLRDNYGIPQVKSVTGNKILRILRAQGIATTIP 85 Query 61 EDLYFLIKKAVAVRKHLEKDRKDADSKFRLILVESRIHRLGRYYRRTKQLPATWKYQSST 120 EDLYFLIKKAV++RKHLEK++KD D KFRLIL ES+IHR+ RYY+R K LP+ WKYQSST Sbjct 86 EDLYFLIKKAVSMRKHLEKNKKDKDCKFRLILTESKIHRISRYYKRKKLLPSNWKYQSST 145 Query 121 ASALVA 126 ASAL+A Sbjct 146 ASALIA 151 Lambda K H 0.320 0.135 0.378 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22588795449 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40