bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_0229_orf1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
5833.PFI0740c 288 1e-76
> 5833.PFI0740c
Length=159
Score = 288 bits (738), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 130/159 (81%), Positives = 145/159 (91%), Gaps = 1/159 (0%)
Query 108 SIARKRLAQERAAWRRDHPAGFSAKYAPMADGSVGQDIMKWICKVPGKKGSIWEGGEYCL 167
SIA+KRLAQERA WR+DHPAGFSAKY+PM+DG G DIMKWICK+PGKKG +WEGGEY L
Sbjct 2 SIAKKRLAQERAEWRKDHPAGFSAKYSPMSDGK-GLDIMKWICKIPGKKGGLWEGGEYPL 60
Query 168 TMEFSEEYPSKPPKCKFAPVLFHPNVYPSGTVCLSILNEDEDWKPSITIKQILLGIQDLL 227
TMEF+E+YPSKPPKCKF VLFHPN+YPSGTVCLSILNEDEDWKPSITIKQILLGIQDLL
Sbjct 61 TMEFTEDYPSKPPKCKFTTVLFHPNIYPSGTVCLSILNEDEDWKPSITIKQILLGIQDLL 120
Query 228 DNPNPQSPAQAEPYMLYCQNRDEYNRRVKNQAIQMRPKD 266
DNPNP SPAQAEP++LY Q+RD Y ++VK QAI+ RPKD
Sbjct 121 DNPNPNSPAQAEPFLLYQQDRDSYEKKVKKQAIEFRPKD 159
Lambda K H
0.314 0.128 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 84358518300
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40