bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_0220_orf3
Length=236
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd1_290 93.6 5e-18
> 5807.cgd1_290
Length=499
Score = 93.6 bits (231), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 71/148 (47%), Gaps = 36/148 (24%)
Query 59 GSGAAHSASAPAAEAAEAEAKKKETELLRLAGKPCPTGTYQLLSVVTHQGRYADSGHYVG 118
G + + A E + E +K ETEL CPTG Y+L VVTHQGR ADSGHYV
Sbjct 383 GRDISEKKKSKAIEKPDQEEQKMETELY----TDCPTGVYELECVVTHQGRTADSGHYVA 438
Query 119 WARAGDAGTLQGPPTAQSEDKEEEEPAAPSGPAAKRRKNVDMWRKFDDDKVSEVPWDSID 178
W + D+E KFDDDKVS + D
Sbjct 439 WRYCPN-------------DRE-------------------YIIKFDDDKVSRIKAKDAD 466
Query 179 LAGGRSDYHVAYLLLMKHILVVPTEEEL 206
L+GGRSDYH+A +LL K ++ +EEE+
Sbjct 467 LSGGRSDYHIAVMLLYKKTVIKASEEEM 494
Lambda K H
0.310 0.125 0.356
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 68043068464
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40