bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0202_orf1 Length=251 Score E Sequences producing significant alignments: (Bits) Value 5833.PF10_0144 360 2e-98 > 5833.PF10_0144 Length=304 Score = 360 bits (925), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 175/250 (70%), Positives = 207/250 (82%), Gaps = 3/250 (1%) Query 4 PKMDPQALKKLGGFGAV--ALAGVAG-AVGLFNTSLYNVEAGHRAIVYNRLRGISSKIYF 60 P D +KKLG GA A+ GV F SLYNVEAG RAI YNR+ G+S+KIY Sbjct 26 PNFDIHQVKKLGKLGATIGAIIGVTSFGSWFFKNSLYNVEAGKRAIKYNRIFGLSNKIYG 85 Query 61 EGTHFCFPFLERPIIYDVRSRPRVLTSLSGSRDLQMVSITCRVLSRPDEGRLPEVYRQLG 120 EGTHF PF ER IIYDVR++PRVL SL+GSRDLQMV+ITCRVLSRP+E +L E+YR LG Sbjct 86 EGTHFLIPFFERSIIYDVRTKPRVLMSLTGSRDLQMVNITCRVLSRPNEKKLVEIYRTLG 145 Query 121 MDYDEKVLPSIINETLKSIISQFNASQLITQRDALSSRIREQLVRRARDFNILLDDVSLT 180 +YDEKVLPSIINE LKS+++Q+NASQLITQR+ +S +REQLV+RA+DFNILLDD S+T Sbjct 146 KEYDEKVLPSIINEVLKSVVAQYNASQLITQREVVSKSVREQLVQRAKDFNILLDDASIT 205 Query 181 HLSFSPEYERAVEAKQVAQQQAERSKYVVLRALEEKKSTIIKAQGEAEAAKLIGSAIKSN 240 HLSFS EYE+AVEAKQVAQQ+AERSKYVVL+A +EKKSTIIKAQGEAE AKLIG A+K N Sbjct 206 HLSFSNEYEKAVEAKQVAQQEAERSKYVVLKAEQEKKSTIIKAQGEAEVAKLIGLAVKDN 265 Query 241 PAFLELRRID 250 PAF+EL++I+ Sbjct 266 PAFMELKKIE 275 Lambda K H 0.320 0.135 0.371 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 76235559246 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40