bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0185_orf2 Length=161 Score E Sequences producing significant alignments: (Bits) Value 5833.PFI0880c 129 2e-29 > 5833.PFI0880c Length=396 Score = 129 bits (325), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 60/152 (39%), Positives = 98/152 (64%), Gaps = 0/152 (0%) Query 10 QKAQVDAYISGYDRDMELIQDEDISYINCGTGSVSGSSALVTASGSKFFSGEKGFCLFEL 69 + A+VD YISG+D +ME+I+D D+++I CG+GS+S + + S S FFS + GFC+ EL Sbjct 245 KDAEVDLYISGHDNNMEVIEDNDMAHITCGSGSMSQGKSGMKNSKSLFFSSDIGFCVHEL 304 Query 70 TADGLITKFINGTNGEVMFEHKQPLKSRPERSTIDQFNYLSEMPEVVYYPVPEMGKLPGK 129 + +G++TKF++ GEV++ HK +K + ++ + + +P V VP G + K Sbjct 305 SNNGIVTKFVSSKKGEVIYTHKLNIKKKKTLDKVNALQHFAALPNVELTDVPSSGPMGNK 364 Query 130 DVFVRVVGTIGLCILTFLASLSLASGISRAMK 161 D FVRVVGTIG+ I + + + +S +S+ MK Sbjct 365 DTFVRVVGTIGILIGSVIVFIGASSFLSKNMK 396 Lambda K H 0.319 0.138 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 26764363279 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40