bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_0155_orf3
Length=372
Score E
Sequences producing significant alignments: (Bits) Value
5833.PFE0465c 135 2e-30
> 5833.PFE0465c
Length=2914
Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 68/211 (32%), Positives = 122/211 (57%), Gaps = 1/211 (0%)
Query 157 LKDIKVCRKTWRIVVKFGWPFDKCPYRLELLPIVKGLVEKVTLQEPQGVSNPRIVQGSGC 216
+K+I TW + + GW + PY ++ L +K + K L + + ++NP+I++G
Sbjct 2699 IKNIHFSPVTWILKLNIGWDINFFPYPIDFLNHIKSEINKEVLFKVKDLNNPKILKGKDI 2758
Query 217 S-TGSPMELHCSGSNLQWLHRLKETAVDHSKLETNDVLAMLQHYGIEAARALYLKEFSRV 275
+ +G+ EL G N+ L+ +K+ +D +KL ND+ A+++ YGIEA R KE +V
Sbjct 2759 THSGAEYELQIEGKNIYKLYNIKDKYIDKTKLYCNDIYAIVKTYGIEAGRLCITKELKKV 2818
Query 276 FAAYGIKVHSSHLGLIADFVTRDGAIIPFNRLGIQHCDSPFLQMAFETSFRFLTEACERS 335
F AYGI++ HL I+DF+T G + FNR G+ + + F +M+FE + FL + C +
Sbjct 2819 FDAYGIQIDFRHLSFISDFMTHTGDLKAFNRHGLGYFRNVFHKMSFECATNFLIQGCIHN 2878
Query 336 AVDNLKTPSAALIVGSPAVIGSHQSQLLAVL 366
++D L T S++L G +G++ + ++ +
Sbjct 2879 SIDYLSTASSSLFFGKHIKVGTNLADIVTCI 2909
Lambda K H
0.314 0.130 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 143415913322
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40