bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_0129_orf2
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd7_4350 157 3e-37
> 5807.cgd7_4350
Length=1660
Score = 157 bits (398), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 129/213 (60%), Gaps = 1/213 (0%)
Query 1 HFCRCIKPNQVKKPRVFETENTLGQLISLSVLEAVAIIHKGFAYRASFADFVADNNILLK 60
F RC+K N+ K P + E + + QL SLS++EA+ ++ KG+AYR +F +F+ +N++++K
Sbjct 653 QFIRCVKANEKKVPNLIEADMVVDQLQSLSIMEAILLVQKGYAYRETFENFMKENSMIMK 712
Query 61 VLGAKLEGGDD-KTASLTMLERLGVPKEEYQLGSTKIFLRKKGWLVIDQYFRSAMANLKP 119
++G + G D K + + +P+ E+Q+G+TKIF++K GW+ ++++FRS +L P
Sbjct 713 LMGQTISSGSDLKQQCRQAMNTMKIPETEWQIGNTKIFIKKDGWIAVERFFRSVTKSLAP 772
Query 120 LIVNLQSIYRAAKARTLYLQFATRVVRLQSLMRRYQIRKDQFKKIELLRTFVGAVATMKL 179
L L+ I+R +K R +F+ ++R QSL+R Y + K+ K LL VG M L
Sbjct 773 LAETLREIFRLSKLRKQLKEFSVSLIRCQSLVRMYILNKEGVAKNRLLNYLVGVSLIMNL 832
Query 180 CLFQQRRTLAAIQIQKMYRGYRARKQTAAIIRK 212
+ I IQ++YRG+R RK+ +R+
Sbjct 833 PNAMRNYNRTIITIQRIYRGHRVRKEIGTALRR 865
Lambda K H
0.327 0.137 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 84358518300
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40