bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0128_orf1 Length=305 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd8_340 108 2e-22 > 5807.cgd8_340 Length=295 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 74/297 (24%), Positives = 130/297 (43%), Gaps = 26/297 (8%) Query 5 FFSSFQGAISRAETAFVREGVACGVRGDGRGRAELRPRVLAVDLLPFSCSSAAIQTEENT 64 F S +IS +E F+ +GV G+R DGR + RP V+A+D++ + S+ I+ +E Sbjct 12 FLKSMTKSISDSEKLFLEDGVDQGIRNDGRDLTDFRPIVIALDVISTANGSSRIRNDELD 71 Query 65 VIATVDADVILPGGGGNQEPYSVSVGCGAAEQELADVTGGDGSSL-----SSLLQAMLEQ 119 +I V + + + + D S S + +++ Sbjct 72 IIVAVKVSFL-------NNLFFFIIALILFSSNIMDKISNVAPSFTEEDYSFYITNIVKD 124 Query 120 LLLPH--LKPLTDPDGRLQWRISIDVIVLRAGGCLLDAVSLAIWGALKALKLPNVMVE-- 175 + + L LT + +L W I ID +L GG ++D V++AI AL+ ++P + V Sbjct 125 MCFKNFDLSKLTILENKLYWNIYIDATILSFGGNMVDWVTIAIHTALRTTRIPKIHVSPS 184 Query 176 ---EEDEKDQGLAITEYKVSCDERIAAGTPYPIDTVPILITAAQIGDTYVWDLTEIEATC 232 +E+ KD Y VS + +GTP+P +P +I+A I +WD+ E C Sbjct 185 ISTKENNKD-----VSYTVS--PSVCSGTPFPFQDIPFIISAGCIRGKVIWDMNMQEQIC 237 Query 233 GDSFLVAAFLPSGACVGLQKFGHVLADCRTLQTTLTTSQRLSREILEDLQRQAEMKK 289 + + + G CV + K D + T + + +S EI + L K+ Sbjct 238 SKTIIALSINSKGECVAMNKVYSNTLDLNLIPTIINKAAEISSEISKSLDEFFSNKQ 294 Lambda K H 0.318 0.135 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 106813807282 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40