bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_0128_orf1
Length=305
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd8_340 108 2e-22
> 5807.cgd8_340
Length=295
Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 130/297 (43%), Gaps = 26/297 (8%)
Query 5 FFSSFQGAISRAETAFVREGVACGVRGDGRGRAELRPRVLAVDLLPFSCSSAAIQTEENT 64
F S +IS +E F+ +GV G+R DGR + RP V+A+D++ + S+ I+ +E
Sbjct 12 FLKSMTKSISDSEKLFLEDGVDQGIRNDGRDLTDFRPIVIALDVISTANGSSRIRNDELD 71
Query 65 VIATVDADVILPGGGGNQEPYSVSVGCGAAEQELADVTGGDGSSL-----SSLLQAMLEQ 119
+I V + + + + D S S + +++
Sbjct 72 IIVAVKVSFL-------NNLFFFIIALILFSSNIMDKISNVAPSFTEEDYSFYITNIVKD 124
Query 120 LLLPH--LKPLTDPDGRLQWRISIDVIVLRAGGCLLDAVSLAIWGALKALKLPNVMVE-- 175
+ + L LT + +L W I ID +L GG ++D V++AI AL+ ++P + V
Sbjct 125 MCFKNFDLSKLTILENKLYWNIYIDATILSFGGNMVDWVTIAIHTALRTTRIPKIHVSPS 184
Query 176 ---EEDEKDQGLAITEYKVSCDERIAAGTPYPIDTVPILITAAQIGDTYVWDLTEIEATC 232
+E+ KD Y VS + +GTP+P +P +I+A I +WD+ E C
Sbjct 185 ISTKENNKD-----VSYTVS--PSVCSGTPFPFQDIPFIISAGCIRGKVIWDMNMQEQIC 237
Query 233 GDSFLVAAFLPSGACVGLQKFGHVLADCRTLQTTLTTSQRLSREILEDLQRQAEMKK 289
+ + + G CV + K D + T + + +S EI + L K+
Sbjct 238 SKTIIALSINSKGECVAMNKVYSNTLDLNLIPTIINKAAEISSEISKSLDEFFSNKQ 294
Lambda K H
0.318 0.135 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 106813807282
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40