bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0118_orf1 Length=241 Score E Sequences producing significant alignments: (Bits) Value 31033.SINFRUP00000180294 83.2 6e-15 > 31033.SINFRUP00000180294 Length=391 Score = 83.2 bits (204), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 58/238 (24%), Positives = 105/238 (44%), Gaps = 29/238 (12%) Query 9 TLMWDSAQFGGLSTRISNRRALNLLRKTIGSASENYPESIGTMYFINAPRTFSTLWSAIR 68 T+++D GL + + A+ + + ENYPE + ++ I AP+ F ++ ++ Sbjct 151 TMIYD---VDGLGLKHLWKPAIETFGEILQMFEENYPEGLKRLFVIKAPKIFPVAYNLVK 207 Query 69 GWLRERTINKIKLLSSDAENILVRNVGGYALPPSLGGTCTSAMADFPPLDTDLG-----P 123 +L E T KI +L ++ + +L++++ LP GGT T D P T + P Sbjct 208 HFLSENTRQKIFVLGANWQEVLLKHIDAEELPVIYGGTLTDPDGD-PRCRTRINHVGPVP 266 Query 124 GSMI----LNVGARRCNQA---------VELVPQKSVVEWVWVAEDFDVGFSAI------ 164 S +NV +C E++ V+ W + E D+GF Sbjct 267 PSYYVRDHVNVDYEQCTVVKRGSSQQLDYEILFPGCVLRWQFATESADIGFGVFLKDRKG 326 Query 165 -WRSQSGSESILEEHRKYPARKRVSGVVTAEQEGTLILSFDNSWGLISSRRVRYKIEV 221 WR + + +L R G +T EQ G +L FDN++ + ++RV + ++V Sbjct 327 EWRKAAQMQEVLPSQRYNAHLVPEDGSLTCEQPGVYVLRFDNTYSIFQAKRVSFTVDV 384 Lambda K H 0.317 0.131 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 71080705449 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40