bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0111_orf5 Length=197 Score E Sequences producing significant alignments: (Bits) Value 5833.PFB0525w 276 3e-73 > 5833.PFB0525w Length=610 Score = 276 bits (705), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 132/201 (65%), Positives = 162/201 (80%), Gaps = 8/201 (3%) Query 1 VKSCLD----NCSGEIDWFEKNQEEGLRARLENILAAPFERLTYTDAVIRLQREEAEGRV 56 +K C+D N +I +FE+N E L RL+NIL F ++TYT+A+ LQ Sbjct 414 IKYCIDYVLNNNFHDIYYFEENVETNLIKRLKNILNEDFAKITYTNAIEILQNYSDS--- 470 Query 57 KFQEKVEWGMDLGSEHERYLTEQLAKKPVIVHDYPKDIKAFYMKQNEDGKTVRAMDVLVP 116 F+ KVEWGMDL SEHER++ E++ KKPVIV++YPKD+KAFYMK NED KTV AMDVLVP Sbjct 471 -FEVKVEWGMDLQSEHERFIAEKIFKKPVIVYNYPKDLKAFYMKLNEDNKTVAAMDVLVP 529 Query 117 KIGELIGGSQREEDLEKLDRMIKEKGLNLDSYWWYRELRSYGTVPHAGFGLGFERLIMLV 176 KIGE+IGGSQRE++LE+LD+MIKEK LN+DSYWWYR+LR YG+ PHAGFGLGFERLIMLV Sbjct 530 KIGEVIGGSQREDNLERLDKMIKEKKLNIDSYWWYRQLRQYGSHPHAGFGLGFERLIMLV 589 Query 177 TGIENIRDTIPYPRYPGHAEF 197 TG++NI+DTIP+PRYPGHAEF Sbjct 590 TGVDNIKDTIPFPRYPGHAEF 610 Lambda K H 0.318 0.139 0.420 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 46738269100 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40