bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0108_orf1 Length=142 Score E Sequences producing significant alignments: (Bits) Value 44689.DDB_0230170 86.7 2e-16 > 44689.DDB_0230170 Length=289 Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 53/145 (36%), Positives = 81/145 (55%), Gaps = 17/145 (11%) Query 7 KPYVVTRPCAADPELSRLIYRHIASHDPDSVFE------GLNVSAETFYSCQAREDQLFR 60 KPY +++P A D EL L+ +D +S+F+ G+N SA++FYS Q R D F Sbjct 152 KPYDISKPVAGDKELIDLL-----KNDFESIFKDRKTVVGINASADSFYSSQGRIDPEFD 206 Query 61 DENESLLETLV---RCGAQTMEMETHQLLHLASRRLELMKAAAVHIGVTSRTNDHFMHPI 117 D NE L+E ++ T+EMET QL HLA+R + +KAA+ I + +R F+ Sbjct 207 DFNEQLIENIIDLYENKVNTLEMETFQLYHLATRSKQPIKAASSTIILANRVTQAFLDNN 266 Query 118 TPSQLNDLVAVTGKACLDALVDVAI 142 T +L G+ACL++L+ V + Sbjct 267 TKVKLE---IEGGRACLESLIKVNL 288 Lambda K H 0.321 0.132 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22741008115 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40