bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0086_orf1 Length=329 Score E Sequences producing significant alignments: (Bits) Value 5833.PF14_0540 250 6e-65 > 5833.PF14_0540 Length=684 Score = 250 bits (638), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 127/287 (44%), Positives = 179/287 (62%), Gaps = 28/287 (9%) Query 39 LSLACNACVTLCDSPEGVSAVLEAMAMPHIMKLLCHSDE-TVVFDALSIAARIAFIGTTQ 97 L L + C+T+C++ G+ +L+ + H +LC S + F+ALSI ++IA+ Q Sbjct 419 LFLTSSTCITICENQIGIDVLLKT-DILHNAVILCESSNPDLAFEALSIISKIAYAANHQ 477 Query 98 QIDQVIGMGTVSTMVKVLTDPAVASPMARARACNTIGYLGCETPAQVQAIIDTQAFPLLL 157 QI +I + + K+L + + P ARARACN +G +GCET ++V+ +I FPLL+ Sbjct 478 QICILISCNVIKALKKILNNTKIK-PGARARACNALGNIGCETASEVELLIKNDVFPLLV 536 Query 158 EIFQVDPDYNTRIEAAYAVCACLSRASPQQVGVIVCCTTRVPSFMERGRGSSHVYFAQEL 217 +IFQ D D+NT+IEAAYAVCACLS+A+ +QVG I+ CT Sbjct 537 DIFQTDNDFNTKIEAAYAVCACLSKANQKQVGYIISCTATTNRL---------------- 580 Query 218 DEPCVLSLTGSNPCLHLIADMLELVSQSDPSNSGSLKLCKAILRGLENILEVGVQEGKSL 277 G N C+ LIADMLELVS+SDP N+GS+KLCK+ILRGLENIL+ G E + L Sbjct 581 ---------GQNICMQLIADMLELVSESDPMNNGSVKLCKSILRGLENILDKGDDETRDL 631 Query 278 DLPENPYARLFQAVQGDIKLARMRYFPDYNVATKAHSILQYFTALSS 324 L ENPY +F+ VQGDIKL +M++FP+Y V K + IL + +L+S Sbjct 632 SLWENPYVFMFKEVQGDIKLLQMQFFPEYYVVNKTYDILAKYFSLTS 678 Lambda K H 0.322 0.133 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 120116452893 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40