bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_0086_orf1
Length=329
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF14_0540 250 6e-65
> 5833.PF14_0540
Length=684
Score = 250 bits (638), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 127/287 (44%), Positives = 179/287 (62%), Gaps = 28/287 (9%)
Query 39 LSLACNACVTLCDSPEGVSAVLEAMAMPHIMKLLCHSDE-TVVFDALSIAARIAFIGTTQ 97
L L + C+T+C++ G+ +L+ + H +LC S + F+ALSI ++IA+ Q
Sbjct 419 LFLTSSTCITICENQIGIDVLLKT-DILHNAVILCESSNPDLAFEALSIISKIAYAANHQ 477
Query 98 QIDQVIGMGTVSTMVKVLTDPAVASPMARARACNTIGYLGCETPAQVQAIIDTQAFPLLL 157
QI +I + + K+L + + P ARARACN +G +GCET ++V+ +I FPLL+
Sbjct 478 QICILISCNVIKALKKILNNTKIK-PGARARACNALGNIGCETASEVELLIKNDVFPLLV 536
Query 158 EIFQVDPDYNTRIEAAYAVCACLSRASPQQVGVIVCCTTRVPSFMERGRGSSHVYFAQEL 217
+IFQ D D+NT+IEAAYAVCACLS+A+ +QVG I+ CT
Sbjct 537 DIFQTDNDFNTKIEAAYAVCACLSKANQKQVGYIISCTATTNRL---------------- 580
Query 218 DEPCVLSLTGSNPCLHLIADMLELVSQSDPSNSGSLKLCKAILRGLENILEVGVQEGKSL 277
G N C+ LIADMLELVS+SDP N+GS+KLCK+ILRGLENIL+ G E + L
Sbjct 581 ---------GQNICMQLIADMLELVSESDPMNNGSVKLCKSILRGLENILDKGDDETRDL 631
Query 278 DLPENPYARLFQAVQGDIKLARMRYFPDYNVATKAHSILQYFTALSS 324
L ENPY +F+ VQGDIKL +M++FP+Y V K + IL + +L+S
Sbjct 632 SLWENPYVFMFKEVQGDIKLLQMQFFPEYYVVNKTYDILAKYFSLTS 678
Lambda K H
0.322 0.133 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 120116452893
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40