bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_0059_orf1
Length=186
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF13_0226 142 4e-33
> 5833.PF13_0226
Length=462
Score = 142 bits (359), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 116/185 (62%), Gaps = 18/185 (9%)
Query 1 DTIEKKVPKIIEVPKYVDTVKYVWKPVEKIVHVERFVPKFDVSLECPAPLIVPYPVQKVT 60
DT+EK+VPKIIEVPKYVD VKYVWKP+EKIV+V++ +PKFDV+LECP PLIVPYPVQ++
Sbjct 268 DTVEKRVPKIIEVPKYVDEVKYVWKPIEKIVYVQKLIPKFDVNLECPPPLIVPYPVQRIK 327
Query 61 EMPAVMVRKNPAEIQETE-VEVVSPDGTVRVPEEYIREYRKTKGQDAGLLCQTMECCG-- 117
++ VMV+KN EI + ++ SP+G++ +PEEYI Y + + + GLL CC
Sbjct 328 QISPVMVKKNNTEIPDYNYYDLNSPEGSLPIPEEYIHHYSRKQKMNKGLLST---CCDKK 384
Query 118 --ADREDEVVFSQGDLSWMQRQHEHE-LSADQEPE----VSRESARSSQTGAILTRQQRS 170
+ E V F LS +EHE + D+E + +S+E+ + + S
Sbjct 385 IVTEEEKNVQFVSVPLS-----NEHESVCVDEEIKKNINMSQENINTQLNNNMDNFIYDS 439
Query 171 DISEG 175
DI +
Sbjct 440 DIKKN 444
Lambda K H
0.313 0.130 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 40752393066
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40