bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_0056_orf3
Length=225
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd6_4190 358 9e-98
> 5807.cgd6_4190
Length=222
Score = 358 bits (918), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 165/222 (74%), Positives = 190/222 (85%), Gaps = 0/222 (0%)
Query 4 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKLRIYDVGRKKADVEEFPGVVHLVSDEYEQI 63
M RRPARCYRYC+ KPYPKSRFCRGVPD K+RIYDVGRKKA+ + FP V+HL+SDEYEQI
Sbjct 1 MARRPARCYRYCRGKPYPKSRFCRGVPDPKIRIYDVGRKKAECDAFPAVIHLISDEYEQI 60
Query 64 SSEALEAARVCANKYMIKHCGKDNFHLRMRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 123
SSEALEAAR+ ANKYMIK CGKDNFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGA+G
Sbjct 61 SSEALEAARISANKYMIKFCGKDNFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAYG 120
Query 124 KPTGLVARVNIGQILMSIRTKESSVNIAALALRRAAFKFPGRQKVFTSNKWGFTPFTREE 183
KPTG ARVNIGQ+LMSIR KE A +ALRRA +KFPGRQKV S+KWGFT FT+EE
Sbjct 121 KPTGTAARVNIGQVLMSIRCKEDKTQTAVMALRRAKYKFPGRQKVVVSDKWGFTKFTKEE 180
Query 184 YKKWQAEGRIVSDGVCAKWLAKKGPLADTFPLAKDIQLPVEN 225
Y K+QAEGRIV DGV K+++ +G L+ FP A +I +P+++
Sbjct 181 YLKYQAEGRIVPDGVNCKYISCRGSLSRIFPEAANINIPLDD 222
Lambda K H
0.324 0.138 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 61360267097
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40