bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_0013_orf3
Length=223
Score E
Sequences producing significant alignments: (Bits) Value
4896.SPAC1805.17 177 3e-43
> 4896.SPAC1805.17
Length=1078
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 94/218 (43%), Positives = 131/218 (60%), Gaps = 1/218 (0%)
Query 7 VVASNIMYVVGQYPRFLRAYWKFLKTVISKLFEFMQEPFPGVRDMACETFLKVANKCKTT 66
VVASNIMYVVGQYPRFL+A+WKFLKTV++KLFEFM E GV+DMAC+TF+K+A KC+
Sbjct 540 VVASNIMYVVGQYPRFLKAHWKFLKTVVNKLFEFMHEYHEGVQDMACDTFIKIAQKCRRH 599
Query 67 IAANHQEDERNFVLSVIENHTQQTEVLDEKQQLLFFEAVGHIISATPAE-VQASCIEGLM 125
A + F+ +I N + TE L +Q F+EA G++ISA P + +Q I LM
Sbjct 600 FVAQQLGETEPFINEIIRNLAKTTEDLTPQQTHTFYEACGYMISAQPQKHLQERLIFDLM 659
Query 126 ANSWEAWQQIVKSGKENQLFLFNPQAAKRLVQILRINQRVAKSTGTAFTPQLSRLYPEMM 185
A +AW+ IV +N L +PQ K L +L+ N S G+ F PQ+++ Y +M+
Sbjct 660 ALPNQAWENIVAQAAQNAQVLGDPQTVKILANVLKTNVAACTSIGSGFYPQIAKNYVDML 719
Query 186 EIYGVYGQRILQEVAAGGPGRVRHSEIKNLIIFKRETL 223
+Y I + VAA G + ++ L K+E L
Sbjct 720 GLYKAVSGLISEVVAAQGNIATKTPHVRGLRTIKKEIL 757
Lambda K H
0.322 0.135 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 61001067300
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40