bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_0010_orf2
Length=251
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd2_330 265 9e-70
> 5807.cgd2_330
Length=535
Score = 265 bits (677), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 129/251 (51%), Positives = 176/251 (70%), Gaps = 4/251 (1%)
Query 4 LRVLSFHAQPVTQVKWSGGPQGYLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALN 63
+ LS H + +T VKW+G Q Y+ S+SRD+ +KV NP TG L++DLKGHAHWVNTLALN
Sbjct 286 INTLSSHTEMITHVKWTGINQEYVVSSSRDSLIKVWNPETGQLLRDLKGHAHWVNTLALN 345
Query 64 SDAVLRRGPF--DNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLIL-R 120
+D + R + + + F S + AA++ + F + C E LLSGSDD+T+ L
Sbjct 346 TDYITRSACYYPTGKNLKLNFKSLQDKIAAAKQSVDNFKKRCKFERLLSGSDDNTMFLWD 405
Query 121 RLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHV 180
L NG + + R+TGH K++N V FSP+G IAS SFDK+IRLW+G +G+++A LRGHV
Sbjct 406 PLGENGR-KPIHRLTGHLKVVNHVAFSPDGRYIASASFDKTIRLWDGHSGKFIAVLRGHV 464
Query 181 GPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASG 240
GPVY ++W+ DSRL+ S S DST+KVW ++LKEDLPGHADEVY IDW+ +G +SG
Sbjct 465 GPVYMISWSVDSRLIASASSDSTVKVWHVSSKKLKEDLPGHADEVYTIDWSIDGSRLSSG 524
Query 241 GKDRMLRIWRH 251
KD +++IWRH
Sbjct 525 SKDCIVKIWRH 535
Lambda K H
0.318 0.133 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 76235559246
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40