bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0004_orf4 Length=223 Score E Sequences producing significant alignments: (Bits) Value 10090.ENSMUSP00000033540 132 6e-30 > 10090.ENSMUSP00000033540 Length=196 Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 72/181 (39%), Positives = 114/181 (62%), Gaps = 10/181 (5%) Query 30 LVIAAKDGE--HRNIPRAKFIENVESFVGSCDPTSVEWLLKEL---LQKYRFMERSLLGQ 84 L AA +G H IP A F+E+V+SF+ + + +LK+L QKY+FME +L + Sbjct 10 LETAAGNGRRLHLGIPEAVFVEDVDSFMKQPGNETADTVLKKLDEQYQKYKFMELNLAQK 69 Query 85 KCMLRAKAVAIKETMEAVAMLQKQRDRAKEGKDGDLTTRLQLAETVYVQATIPPKDTVCL 144 K L+ + IK+T+E + +QK+++ + TR LA+ +Y +A++PP D VCL Sbjct 70 KRRLKGQIPEIKQTLEILKYMQKKKEST-----NSMETRFLLADNLYCKASVPPTDKVCL 124 Query 145 WLAADVFVEYTLEEAEEVLSKSLNSATKYLGEAAADLEWLREQIIMTEVNGARVHNFAVH 204 WL A+V +EY ++EA+ +L K+L++ATK L DL++LR+Q TEVN ARV+N+ V Sbjct 125 WLGANVMLEYDIDEAQALLEKNLSTATKNLDSLEEDLDFLRDQFTTTEVNMARVYNWDVK 184 Query 205 K 205 + Sbjct 185 R 185 Lambda K H 0.318 0.130 0.368 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 61001067300 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40