bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
164,496 sequences; 82,071,388 total letters
Query= Emax_3000_orf1
Length=142
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_115350 hypothetical protein ; K12197 charged multiv... 185 5e-47
cel:F23C8.6 hypothetical protein; K12197 charged multivesicula... 81.3 9e-16
ath:AT1G17730 VPS46.1 (VACUOLAR PROTEIN SORTING 46.1); K12197 ... 80.5 2e-15
xla:414667 chmp1a; chromatin modifying protein 1A; K12197 char... 75.1 7e-14
mmu:234852 Chmp1a, 2900018H07Rik, Pcoln3; chromatin modifying ... 73.9 1e-13
bbo:BBOV_IV005900 23.m06461; hypothetical protein; K12197 char... 73.9 1e-13
dre:393535 chmp1a, KM0004, MGC65914, pcoln3, wu:fb50a12, zgc:6... 71.2 8e-13
sce:YKR035W-A DID2, CHM1, FTI1, VPL30, VPS46; Class E protein ... 69.3 4e-12
dre:336426 chmp1b, Chmp1.5, fb10c03, wu:fb10c03, zgc:56134; ch... 67.0 2e-11
ath:AT1G73030 VPS46.2; K12197 charged multivesicular body prot... 65.1 7e-11
pfa:PFI0300w developmental protein, putative; K12197 charged m... 58.9 5e-09
mmu:67064 Chmp1b, 2810405I11Rik, Chmp1b1; chromatin modifying ... 57.4 1e-08
mmu:67028 2610002M06Rik, 8430408J07Rik, AI876413, Chmp1b2; RIK... 55.5 5e-08
hsa:57132 CHMP1B, C10orf2, C18-ORF2, C18orf2, CHMP1.5, Vps46-2... 53.5 2e-07
xla:379412 chmp1b, MGC64275; chromatin modifying protein 1B; K... 51.2 1e-06
cpv:cgd1_1320 developmental protein ; K12197 charged multivesi... 44.3 1e-04
dre:568764 mKIAA0969 protein-like 32.0 0.63
mmu:68942 Chmp2b, 1190006E07Rik; chromatin modifying protein 2... 32.0 0.68
cel:F30A10.10 hypothetical protein 30.8 1.4
hsa:25978 CHMP2B, CHMP2.5, DKFZp564O123, DMT1, VPS2-2, VPS2B; ... 30.4 1.7
dre:569532 novel protein similar to H.sapiens CHMP2B, chromati... 30.0 2.6
dre:323706 rtn1a, fb64c01, im:7136397, rtn1, rtn5, wu:fb64c01,... 29.6 3.0
hsa:55735 DNAJC11, FLJ10737, dJ126A5.1; DnaJ (Hsp40) homolog, ... 29.6 3.6
mmu:230935 Dnajc11, E030019A03Rik; DnaJ (Hsp40) homolog, subfa... 29.3 4.1
xla:447576 chmp2b-b, MGC84310, chmp2.5, dmt1, vps2-2, vps2b; c... 29.3 4.3
dre:322953 dnajc11, wu:fb77f10, wu:fc22f02, zgc:55845; DnaJ (H... 29.3 4.6
tpv:TP03_0651 hypothetical protein 28.5 6.6
xla:444471 dnajc11, MGC81794; DnaJ (Hsp40) homolog, subfamily ... 28.5 6.8
dre:793687 si:ch1073-126c3.3 28.5 7.4
mmu:14319 Fth1, AL022624, AL033366, FHC, Fth, H-ferritin, HFt,... 28.5 7.5
hsa:2495 FTH1, FHC, FTH, FTHL6, MGC104426, PIG15, PLIF; ferrit... 28.1 8.5
tgo:TGME49_067870 hypothetical protein 28.1 9.1
hsa:22998 LIMCH1, DKFZp434I0312, DKFZp686A01247, DKFZp686B2470... 28.1 9.3
> tgo:TGME49_115350 hypothetical protein ; K12197 charged multivesicular
body protein 1
Length=199
Score = 185 bits (469), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 89/136 (65%), Positives = 114/136 (83%), Gaps = 0/136 (0%)
Query 3 DLGIKARELKRQSDRCYRESLQERDKIRRALLRQNQEGARIFAQNYVRKKQEGLNSLHMS 62
D+ IKARELKRQS+RCYRES E+ K++ AL + N EGAR+FAQN++RK+QEGL+ L +S
Sbjct 13 DMKIKARELKRQSERCYRESEGEKGKVKAALQKNNSEGARVFAQNFIRKQQEGLHCLQLS 72
Query 63 SKLEAVASRLDGAHRSHQLTTKIHSVASGLSGALRKLDSSSSLREIELFSKLFDDLDVRS 122
SKL+AVASRLD AHRS Q++ ++ S A GLS ALR LD +SLR++E F+KLFDDLDVRS
Sbjct 73 SKLDAVASRLDAAHRSQQMSKQMRSAAYGLSNALRTLDGGTSLRQMEEFAKLFDDLDVRS 132
Query 123 DSVSSLLDVSTSSALP 138
DSVS+LLD STS+++P
Sbjct 133 DSVSTLLDASTSTSIP 148
> cel:F23C8.6 hypothetical protein; K12197 charged multivesicular
body protein 1
Length=205
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 81/136 (59%), Gaps = 0/136 (0%)
Query 3 DLGIKARELKRQSDRCYRESLQERDKIRRALLRQNQEGARIFAQNYVRKKQEGLNSLHMS 62
DL A++L++ + RC ++ E+DK+ A+ + N+E A++ A+N +RKK E +N + M+
Sbjct 16 DLKFAAKQLEKNAQRCEKDEKVEKDKLTAAIKKGNKEVAQVHAENAIRKKNEAVNYIKMA 75
Query 63 SKLEAVASRLDGAHRSHQLTTKIHSVASGLSGALRKLDSSSSLREIELFSKLFDDLDVRS 122
++++AVA+R+ A ++T + V + A++ ++ + ++ F + F+DLDV +
Sbjct 76 ARIDAVAARVQTAATQKRVTASMSGVVKAMESAMKSMNLEKVQQLMDRFERDFEDLDVTT 135
Query 123 DSVSSLLDVSTSSALP 138
++ +D +T P
Sbjct 136 KTMEKTMDGTTVLNAP 151
> ath:AT1G17730 VPS46.1 (VACUOLAR PROTEIN SORTING 46.1); K12197
charged multivesicular body protein 1
Length=203
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 88/144 (61%), Gaps = 10/144 (6%)
Query 3 DLGIKARELKRQSDRCYRESLQERDKIRRALLRQNQEGARIFAQNYVRKKQEGLNSLHMS 62
+L ++ L+RQ+ +C +E E+ K+++A+ + N +GARI+A+N +RK+ E +N L +S
Sbjct 13 ELKFTSKSLQRQARKCEKEERSEKLKVKKAIEKGNMDGARIYAENAIRKRSEQMNYLRLS 72
Query 63 SKLEAVASRLDGAHRSHQLTTKIHSVASGL-----SGALRKLDSSSSLREIELFSKLFDD 117
S+L+AV +RLD + +T + ++ L +G L+K+ + ++ F K F +
Sbjct 73 SRLDAVVARLDTQAKMATITKSMTNIVKSLESSLTTGNLQKMSET-----MDSFEKQFVN 127
Query 118 LDVRSDSVSSLLDVSTSSALPSGK 141
++V+++ + + + STS + P G+
Sbjct 128 MEVQAEFMDNAMAGSTSLSTPEGE 151
> xla:414667 chmp1a; chromatin modifying protein 1A; K12197 charged
multivesicular body protein 1
Length=196
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 80/134 (59%), Gaps = 4/134 (2%)
Query 4 LGIKARELKRQSDRCYRESLQERDKIRRALLRQNQEGARIFAQNYVRKKQEGLNSLHMSS 63
L A++L++ + + ++S E+ K+++AL ++N E AR++A+N +RKK EGLN L M+S
Sbjct 8 LKFTAKQLEKLAKKAEKDSNTEQAKVKKALQQKNVEVARVYAENAIRKKNEGLNWLRMAS 67
Query 64 KLEAVASRLDGAHRSHQLTTKIHSVASGLSGALRKLDSSSSLREIELFSKLFDDLDVRS- 122
+++AVAS++ A +T + V L AL +D ++ F + +LDV +
Sbjct 68 RVDAVASKVQTAVTMKGVTKNMAQVTKALDKALSSMDLQKVSAVMDKFDQQVQNLDVHTS 127
Query 123 ---DSVSSLLDVST 133
DS+SS + ++T
Sbjct 128 VMEDSMSSAMTLTT 141
> mmu:234852 Chmp1a, 2900018H07Rik, Pcoln3; chromatin modifying
protein 1A; K12197 charged multivesicular body protein 1
Length=196
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 79/134 (58%), Gaps = 4/134 (2%)
Query 4 LGIKARELKRQSDRCYRESLQERDKIRRALLRQNQEGARIFAQNYVRKKQEGLNSLHMSS 63
L A++L++ + + ++S E+ K+++AL ++N E AR++A+N +RKK EG+N L M+S
Sbjct 8 LKFTAKQLEKLAKKAEKDSKAEQAKVKKALQQKNVECARVYAENAIRKKNEGVNWLRMAS 67
Query 64 KLEAVASRLDGAHRSHQLTTKIHSVASGLSGALRKLDSSSSLREIELFSKLFDDLDVRS- 122
+++AVAS++ A +T + V L AL +D ++ F + +LDV +
Sbjct 68 RVDAVASKVQTAVTMKGVTKNMAQVTKALDKALSAMDLQKVSAVMDRFEQQVQNLDVHTS 127
Query 123 ---DSVSSLLDVST 133
DSVSS ++T
Sbjct 128 VMEDSVSSATTLTT 141
> bbo:BBOV_IV005900 23.m06461; hypothetical protein; K12197 charged
multivesicular body protein 1
Length=190
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 69/118 (58%), Gaps = 1/118 (0%)
Query 3 DLGIKARELKRQSDRCYRESLQERDKIRRALLRQNQEGARIFAQNYVRKKQEGLNSLHMS 62
DL ++ARE + +C RE + E++K++R+L + N E ARI A N +RK E L L
Sbjct 13 DLRLQAREALKLQSQCEREEVNEKEKVKRSLEKGNMEAARIHAGNAIRKHNEALRYLQYH 72
Query 63 SKLEAVASRLDGAHRSHQLTTKIHSVASGLSGALRKLDSSSSLREIELFSKLFDDLDV 120
SKLE + S+++ A R++ L ++ LS + K S+ + ++ K+FDDLDV
Sbjct 73 SKLEILRSQVESAERTNALNEQLKEALPRLS-KMTKYKSNGNTNLMQELEKIFDDLDV 129
> dre:393535 chmp1a, KM0004, MGC65914, pcoln3, wu:fb50a12, zgc:65914,
zgc:85863; chromatin modifying protein 1A; K12197 charged
multivesicular body protein 1
Length=198
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 77/134 (57%), Gaps = 4/134 (2%)
Query 4 LGIKARELKRQSDRCYRESLQERDKIRRALLRQNQEGARIFAQNYVRKKQEGLNSLHMSS 63
L +++L+R + + ++S E+ K+++AL ++N E AR++A+N +RKK EGLN L M+S
Sbjct 8 LKFTSKQLERLAKKAEKDSKSEQAKVKKALQQKNVECARVYAENAIRKKNEGLNWLRMAS 67
Query 64 KLEAVASRLDGAHRSHQLTTKIHSVASGLSGALRKLDSSSSLREIELFSKLFDDLDVRS- 122
+++AVAS++ A + + V L AL +D ++ F +LDV +
Sbjct 68 RVDAVASKVQTALTMKGVAKNMTQVTKALDKALSSMDLQKVSAVMDKFETQVQNLDVHTS 127
Query 123 ---DSVSSLLDVST 133
DS+SS +ST
Sbjct 128 VMEDSMSSATTLST 141
> sce:YKR035W-A DID2, CHM1, FTI1, VPL30, VPS46; Class E protein
of the vacuolar protein-sorting (Vps) pathway; binds Vps4p
and directs it to dissociate ESCRT-III complexes; forms a functional
and physical complex with Ist1p; human ortholog may
be altered in breast tumors; K12197 charged multivesicular
body protein 1
Length=204
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 80/132 (60%), Gaps = 4/132 (3%)
Query 4 LGIKARELKRQSDRCYRESLQERDKIRRALLRQNQEGARIFAQNYVRKKQEGLNSLHMSS 63
L +++L++Q+++ +E QE +K++RAL +N++ +RI+A N +RKK E L L ++S
Sbjct 16 LKFTSKQLQKQANKASKEEKQETNKLKRAL-NENEDISRIYASNAIRKKNERLQLLKLAS 74
Query 64 KLEAVASRLDGAHRSHQLTTKIHSVASGLSGALRKLDSSSSLREIELFSKLFDDLDVRSD 123
++++VASR+ A Q++ + V G+ AL+ ++ ++ F + F+DLD
Sbjct 75 RVDSVASRVQTAVTMRQVSASMGQVCKGMDKALQNMNLQQITMIMDKFEQQFEDLDT--- 131
Query 124 SVSSLLDVSTSS 135
SV+ D+ +S
Sbjct 132 SVNVYEDMGVNS 143
> dre:336426 chmp1b, Chmp1.5, fb10c03, wu:fb10c03, zgc:56134;
chromatin modifying protein 1B; K12197 charged multivesicular
body protein 1
Length=199
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 82/139 (58%), Gaps = 0/139 (0%)
Query 3 DLGIKARELKRQSDRCYRESLQERDKIRRALLRQNQEGARIFAQNYVRKKQEGLNSLHMS 62
+L A+EL+R S +C +E E+ K+++A+ + N E ARI A+N +R+K + +N L MS
Sbjct 10 NLKFAAKELQRNSKKCDKEEKAEKVKVKKAIQKGNMEVARIHAENAIRQKNQSVNFLRMS 69
Query 63 SKLEAVASRLDGAHRSHQLTTKIHSVASGLSGALRKLDSSSSLREIELFSKLFDDLDVRS 122
++++AVA+R+ A +Q+T + V G+ L+ ++ +E F + F+ LDV++
Sbjct 70 ARVDAVAARVQTAVTMNQVTKSMAGVVKGMDATLKSMNLEKISGLMEKFERQFETLDVQT 129
Query 123 DSVSSLLDVSTSSALPSGK 141
+ + +T+ P G+
Sbjct 130 AQMEDSMSSTTTLTTPQGQ 148
> ath:AT1G73030 VPS46.2; K12197 charged multivesicular body protein
1
Length=203
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 88/144 (61%), Gaps = 10/144 (6%)
Query 3 DLGIKARELKRQSDRCYRESLQERDKIRRALLRQNQEGARIFAQNYVRKKQEGLNSLHMS 62
DL ++ L+RQS +C +E E+ K+++A+ + N +GARI+A+N +RK+ E +N L ++
Sbjct 13 DLKFTSKSLQRQSRKCEKEEKAEKLKVKKAIEKGNMDGARIYAENAIRKRSEQMNYLRLA 72
Query 63 SKLEAVASRLDGAHRSHQLTTKIHSVASGL-----SGALRKLDSSSSLREIELFSKLFDD 117
S+L+AV +RLD + +T + ++ L +G L+K+ + ++ F K F +
Sbjct 73 SRLDAVVARLDTQAKMTTITKSMTNIVKSLESSLATGNLQKMSET-----MDSFEKQFVN 127
Query 118 LDVRSDSVSSLLDVSTSSALPSGK 141
++V+++ + + + STS + P G+
Sbjct 128 MEVQAEFMENAMAGSTSLSTPEGE 151
> pfa:PFI0300w developmental protein, putative; K12197 charged
multivesicular body protein 1
Length=195
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 74/136 (54%), Gaps = 0/136 (0%)
Query 4 LGIKARELKRQSDRCYRESLQERDKIRRALLRQNQEGARIFAQNYVRKKQEGLNSLHMSS 63
L +K +EL++ S R E + +++A+ E AR++A+ +RKK E +N L++S+
Sbjct 14 LKLKTKELEKLSQRSELEEKKLIGDVKKAIQAGKIELARLYAEKCIRKKNEKVNYLNLSN 73
Query 64 KLEAVASRLDGAHRSHQLTTKIHSVASGLSGALRKLDSSSSLREIELFSKLFDDLDVRSD 123
KL+ + SRL+GAHR L + + + + ++ ++ +FD++ + S+
Sbjct 74 KLDVLVSRLEGAHRCASLVKDVGVMIPLIQKINAETNAIKIGNDVTKLENIFDEISISSE 133
Query 124 SVSSLLDVSTSSALPS 139
++ + S++ + P+
Sbjct 134 LINDTVQTSSAISAPT 149
> mmu:67064 Chmp1b, 2810405I11Rik, Chmp1b1; chromatin modifying
protein 1B; K12197 charged multivesicular body protein 1
Length=199
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 71/120 (59%), Gaps = 0/120 (0%)
Query 3 DLGIKARELKRQSDRCYRESLQERDKIRRALLRQNQEGARIFAQNYVRKKQEGLNSLHMS 62
+L A+EL R S +C +E E+ KI++A+ + N E ARI A+N +R+K +G+N L MS
Sbjct 10 NLKFAAKELNRSSKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQGVNFLRMS 69
Query 63 SKLEAVASRLDGAHRSHQLTTKIHSVASGLSGALRKLDSSSSLREIELFSKLFDDLDVRS 122
++++AVA+R+ A ++T + V + L+ ++ ++ F F+ LDV++
Sbjct 70 ARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKSMNLEKISALMDKFEHQFETLDVQT 129
> mmu:67028 2610002M06Rik, 8430408J07Rik, AI876413, Chmp1b2; RIKEN
cDNA 2610002M06 gene; K12197 charged multivesicular body
protein 1
Length=199
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 70/120 (58%), Gaps = 0/120 (0%)
Query 3 DLGIKARELKRQSDRCYRESLQERDKIRRALLRQNQEGARIFAQNYVRKKQEGLNSLHMS 62
+L A+EL R + +C +E E+ KI++A+ + N E ARI A+N +R+K + +N L MS
Sbjct 10 NLKFAAKELNRNAKKCDKEEKAEKAKIKKAIQKGNTEVARIHAENAIRQKNQAINFLRMS 69
Query 63 SKLEAVASRLDGAHRSHQLTTKIHSVASGLSGALRKLDSSSSLREIELFSKLFDDLDVRS 122
++++AVA+R+ A ++T + V + LR ++ ++ F F+ LDV++
Sbjct 70 ARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLRSMNLEKISALMDKFEHQFETLDVQT 129
> hsa:57132 CHMP1B, C10orf2, C18-ORF2, C18orf2, CHMP1.5, Vps46-2,
Vps46B; chromatin modifying protein 1B; K12197 charged multivesicular
body protein 1
Length=199
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 70/120 (58%), Gaps = 0/120 (0%)
Query 3 DLGIKARELKRQSDRCYRESLQERDKIRRALLRQNQEGARIFAQNYVRKKQEGLNSLHMS 62
+L A+EL R + +C +E E+ KI++A+ + N E ARI A+N +R+K + +N L MS
Sbjct 10 NLKFAAKELSRSAKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAVNFLRMS 69
Query 63 SKLEAVASRLDGAHRSHQLTTKIHSVASGLSGALRKLDSSSSLREIELFSKLFDDLDVRS 122
++++AVA+R+ A ++T + V + L+ ++ ++ F F+ LDV++
Sbjct 70 ARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISALMDKFEHQFETLDVQT 129
> xla:379412 chmp1b, MGC64275; chromatin modifying protein 1B;
K12197 charged multivesicular body protein 1
Length=199
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 57/105 (54%), Gaps = 0/105 (0%)
Query 37 NQEGARIFAQNYVRKKQEGLNSLHMSSKLEAVASRLDGAHRSHQLTTKIHSVASGLSGAL 96
N E ARI A+N +R+K +G+N L MS++++AVA+R+ A ++T + V + L
Sbjct 44 NTEIARIHAENAIRQKNQGINFLRMSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATL 103
Query 97 RKLDSSSSLREIELFSKLFDDLDVRSDSVSSLLDVSTSSALPSGK 141
+ ++ ++ F F+ LDV++ + + +T+ P +
Sbjct 104 KSMNLEKISALMDKFEHQFETLDVQTQQMEDTMSNTTTLTTPQNQ 148
> cpv:cgd1_1320 developmental protein ; K12197 charged multivesicular
body protein 1
Length=188
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 56/94 (59%), Gaps = 0/94 (0%)
Query 3 DLGIKARELKRQSDRCYRESLQERDKIRRALLRQNQEGARIFAQNYVRKKQEGLNSLHMS 62
+L ++ +EL+RQ ++ R+S ER K + A++ + ++I+A+N +R ++E L M
Sbjct 13 ELKLQKKELERQYNKRDRDSKSERKKAKDAIISGKADLSKIYAENSLRMQEECKELLIMI 72
Query 63 SKLEAVASRLDGAHRSHQLTTKIHSVASGLSGAL 96
SKL+ + +RL+ A +++T++ + L L
Sbjct 73 SKLDRLCARLEKASSKEKISTQLLDIMPKLKKQL 106
> dre:568764 mKIAA0969 protein-like
Length=1086
Score = 32.0 bits (71), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Query 60 HMSSKLEAVASRLDGAHRSHQ---LTTKIHSVASGLSGALRKLDSSSSLREIELFSKLFD 116
H+ + V L+G H+++ T H VASG SG+ +S L + L S L
Sbjct 673 HIQKEFWRVQDVLEGLHKNNPSRGTDTAKHRVASGASGSFSTNSPASPLSSVSLTSPLSP 732
Query 117 DLDVRSDSVSSLLDVSTSSALPS 139
V S ++T A+P
Sbjct 733 FSPVPGSQPSPTKHLATEEAIPP 755
> mmu:68942 Chmp2b, 1190006E07Rik; chromatin modifying protein
2B; K12192 charged multivesicular body protein 2B
Length=213
Score = 32.0 bits (71), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 16/94 (17%), Positives = 48/94 (51%), Gaps = 0/94 (0%)
Query 37 NQEGARIFAQNYVRKKQEGLNSLHMSSKLEAVASRLDGAHRSHQLTTKIHSVASGLSGAL 96
N+E R+ A+ V +++ + +SSK+ +++++ + ++ + + A +
Sbjct 54 NKEACRVLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVN 113
Query 97 RKLDSSSSLREIELFSKLFDDLDVRSDSVSSLLD 130
+K+D +L+ ++ F K +++ + ++ LD
Sbjct 114 KKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLD 147
> cel:F30A10.10 hypothetical protein
Length=1262
Score = 30.8 bits (68), Expect = 1.4, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Query 28 KIRRALLRQNQEGARIFAQNYVRKKQEGLNSLHMSSKLEAVASRLDGAHRSHQLTT---- 83
++++ +QN E +++Q RK G N + S + + V+SR+ SH++ T
Sbjct 637 ELKKRTRQQNGEVKYVYSQRTPRKSHNGTNGTNSSPQKQPVSSRVAALLSSHEIPTCGHG 696
Query 84 --KIHSVASGLSGALRKLDSSSSLREIELFSKLFDD 117
I + G A+ + + + LRE + K+ D
Sbjct 697 KMSIDPILYGDVKAVSRAPAIALLREYDFRVKIVYD 732
> hsa:25978 CHMP2B, CHMP2.5, DKFZp564O123, DMT1, VPS2-2, VPS2B;
chromatin modifying protein 2B; K12192 charged multivesicular
body protein 2B
Length=213
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/94 (15%), Positives = 48/94 (51%), Gaps = 0/94 (0%)
Query 37 NQEGARIFAQNYVRKKQEGLNSLHMSSKLEAVASRLDGAHRSHQLTTKIHSVASGLSGAL 96
N+E ++ A+ V +++ + +SSK+ +++++ + ++ + + A +
Sbjct 54 NKEACKVLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVN 113
Query 97 RKLDSSSSLREIELFSKLFDDLDVRSDSVSSLLD 130
+K+D +L+ ++ F K +++ + ++ LD
Sbjct 114 KKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLD 147
> dre:569532 novel protein similar to H.sapiens CHMP2B, chromatin
modifying protein 2B (CHMP2B); K12192 charged multivesicular
body protein 2B
Length=216
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/122 (18%), Positives = 60/122 (49%), Gaps = 0/122 (0%)
Query 9 RELKRQSDRCYRESLQERDKIRRALLRQNQEGARIFAQNYVRKKQEGLNSLHMSSKLEAV 68
R++ R R+ Q +I++ N+E +I A+ V+ +++ + +SSK+ ++
Sbjct 26 RQITRDRAALERQERQMEMEIKKMAKTGNREACKILAKQLVQLRKQKNRTYAVSSKVTSM 85
Query 69 ASRLDGAHRSHQLTTKIHSVASGLSGALRKLDSSSSLREIELFSKLFDDLDVRSDSVSSL 128
+++ + ++ + + A + +++D +L+ ++ F K + + D ++S
Sbjct 86 STQTKVMNSQMKMAGAMSTTAKTMQTVNKRMDPKKTLQTMQDFQKENMKMGMTEDMLNST 145
Query 129 LD 130
LD
Sbjct 146 LD 147
> dre:323706 rtn1a, fb64c01, im:7136397, rtn1, rtn5, wu:fb64c01,
wu:fc07e07, wu:fq24d12, zgc:113566, zgc:73298, zgc:86778;
reticulon 1a
Length=818
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Query 63 SKLEAVASRLDGAHRSHQLTTKIHSVASGLSGALRKLDSSSSLREIELFSKLFDDLDVRS 122
S++E VA LD H LT+K G S + S + S FD
Sbjct 394 SEIEQVAEELDSPL--HDLTSKTPPAKGGFSPTSNPFEPPSYTSATDKASNPFDKPQTNK 451
Query 123 DSVSSLLDVSTSSALPSGKS 142
S S+ D+S S + G+S
Sbjct 452 VSASNPFDLSAGSKMGFGQS 471
> hsa:55735 DNAJC11, FLJ10737, dJ126A5.1; DnaJ (Hsp40) homolog,
subfamily C, member 11; K09531 DnaJ homolog subfamily C member
11
Length=559
Score = 29.6 bits (65), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 10/76 (13%)
Query 56 LNSLHMSSKLEAVASRLDGAHRSHQLTTKIHSVASGLSGALRKLDSSSSLREIE------ 109
+N +H+S +EA + D A S L+T+ + ++ ALR++ S+ E+E
Sbjct 159 INKMHISQSIEAPLTATDTAILSGSLSTQNGNGGGSINFALRRVTSAKGWGELEFGAGDL 218
Query 110 ---LFS-KLFDDLDVR 121
LF KLF +L R
Sbjct 219 QGPLFGLKLFRNLTPR 234
> mmu:230935 Dnajc11, E030019A03Rik; DnaJ (Hsp40) homolog, subfamily
C, member 11; K09531 DnaJ homolog subfamily C member
11
Length=559
Score = 29.3 bits (64), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 10/76 (13%)
Query 56 LNSLHMSSKLEAVASRLDGAHRSHQLTTKIHSVASGLSGALRKLDSSSSLREIE------ 109
+N +H+S +EA + D A S L+T+ + ++ ALR++ S+ E+E
Sbjct 159 INKMHISQSIEAPLTATDTAILSGSLSTQNGNGGGSVNFALRRVTSAKGWGELEFGAGDL 218
Query 110 ---LFS-KLFDDLDVR 121
LF KLF +L R
Sbjct 219 QGPLFGLKLFRNLTPR 234
> xla:447576 chmp2b-b, MGC84310, chmp2.5, dmt1, vps2-2, vps2b;
chromatin modifying protein 2B; K12192 charged multivesicular
body protein 2B
Length=214
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/94 (15%), Positives = 48/94 (51%), Gaps = 0/94 (0%)
Query 37 NQEGARIFAQNYVRKKQEGLNSLHMSSKLEAVASRLDGAHRSHQLTTKIHSVASGLSGAL 96
N++ R+ A+ V+ +++ + +SSK+ +++++ ++ + + A +
Sbjct 54 NKDACRVLAKQLVQLRKQKTRTYAVSSKVTSMSTQTKVMSSQMKMAGAMSTTAKTMQAVN 113
Query 97 RKLDSSSSLREIELFSKLFDDLDVRSDSVSSLLD 130
+K+D +L+ ++ F K +++ + ++ LD
Sbjct 114 KKMDPQKTLQTMQNFQKENMKMEMTDEMINDTLD 147
> dre:322953 dnajc11, wu:fb77f10, wu:fc22f02, zgc:55845; DnaJ
(Hsp40) homolog, subfamily C, member 11; K09531 DnaJ homolog
subfamily C member 11
Length=563
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 0/55 (0%)
Query 56 LNSLHMSSKLEAVASRLDGAHRSHQLTTKIHSVASGLSGALRKLDSSSSLREIEL 110
+N +H+S +EA + D A S L+T + +S ALR++ S+ E+E
Sbjct 163 INKMHISQSIEAPLTTSDTAVLSGSLSTHNGNGGGNISLALRRVTSAKGWGEVEF 217
> tpv:TP03_0651 hypothetical protein
Length=2053
Score = 28.5 bits (62), Expect = 6.6, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query 46 QNYVRKKQEGLNSLHMSSKLEAVASRLDGAHRSHQL-TTKIHSVASGL------SGALR- 97
+N+V + + L + +AS + +H L TT+IH V SG +G+L
Sbjct 1493 RNFVPTSRNNMLELVGNLVFHNMASFIRFSHSVDSLDTTRIHPVESGFIAQKLCNGSLDD 1552
Query 98 KLDSSSSLREIELFSKLFDDLDVRSDSV 125
KLD S+ EI D+LD+ S SV
Sbjct 1553 KLDGEDSIHEILANPAKLDELDLESYSV 1580
> xla:444471 dnajc11, MGC81794; DnaJ (Hsp40) homolog, subfamily
C, member 11; K09531 DnaJ homolog subfamily C member 11
Length=239
Score = 28.5 bits (62), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 0/55 (0%)
Query 56 LNSLHMSSKLEAVASRLDGAHRSHQLTTKIHSVASGLSGALRKLDSSSSLREIEL 110
+N +H+S +EA + D A S L+T+ + ++ LR++ S+ E+E
Sbjct 121 INRMHISQSIEAPLTATDTAILSGSLSTQNGNGGGSINATLRRVTSAKGWGELEF 175
> dre:793687 si:ch1073-126c3.3
Length=268
Score = 28.5 bits (62), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query 4 LGIKARELKRQSDRCYRESLQERDKIRRALLRQNQEGARIFAQNYVRKKQEGLNSLHMSS 63
LG++ ELK D+ RE+ ER+K + ++ N E + +N V Q S
Sbjct 84 LGLQT-ELKDNLDKLKRETCDEREKFLKEMITFNSEFNLVSNRNAVLHSQ-------TRS 135
Query 64 KLEAVASRLDGAHRSHQLTTKIHSVASGLSGALRKLDS 101
K++++ + H+ L + H++ S + R L++
Sbjct 136 KIQSLELEAEALHKELNLMKEKHTLWSSMEAEKRSLEA 173
> mmu:14319 Fth1, AL022624, AL033366, FHC, Fth, H-ferritin, HFt,
MFH; ferritin heavy chain 1 (EC:1.16.3.1); K00522 ferritin
heavy chain [EC:1.16.3.1]
Length=182
Score = 28.5 bits (62), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Query 20 RESLQERDKIRRALLRQNQEGARIFAQNYVRKK-----QEGLNSLHMSSKLE 66
+S +ER+ + + QNQ G RIF Q+ ++K + GLN++ + LE
Sbjct 58 HQSHEEREHAEKLMKLQNQRGGRIFLQD-IKKPDRDDWESGLNAMECALHLE 108
> hsa:2495 FTH1, FHC, FTH, FTHL6, MGC104426, PIG15, PLIF; ferritin,
heavy polypeptide 1 (EC:1.16.3.1); K00522 ferritin heavy
chain [EC:1.16.3.1]
Length=183
Score = 28.1 bits (61), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Query 20 RESLQERDKIRRALLRQNQEGARIFAQNYVRKK-----QEGLNSLHMSSKLE 66
+S +ER+ + + QNQ G RIF Q+ ++K + GLN++ + LE
Sbjct 58 HQSHEEREHAEKLMKLQNQRGGRIFLQD-IKKPDCDDWESGLNAMECALHLE 108
> tgo:TGME49_067870 hypothetical protein
Length=301
Score = 28.1 bits (61), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query 83 TKIHSVASGLSGALRKLDSSSSLREIELFSKLFDDLDVRSDSVSSLL 129
K S+ASG A ++LD ++LRE LF DD + D V+ LL
Sbjct 211 VKCQSIASGKERAEQRLDEEATLREA-LFVSTLDD---QRDEVTRLL 253
> hsa:22998 LIMCH1, DKFZp434I0312, DKFZp686A01247, DKFZp686B2470,
DKFZp686G18243, DKFZp686G2094, DKFZp781C1754, DKFZp781I1455,
LIMCH1A, LMO7B, MGC72127; LIM and calponin homology domains
1
Length=1057
Score = 28.1 bits (61), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 19/130 (14%)
Query 12 KRQSDRCYRESLQERDKIRRALLR-----QNQEGARIFAQNYVRKKQEGLNSLHMSSKLE 66
+R+S + YRE +QE+++ R L ++QE A Q Y+ + +S E
Sbjct 405 RRKSIKTYREIVQEKERRERELHEAYKNARSQEEAEGILQQYIER-------FTIS---E 454
Query 67 AVASRLDGAHRSHQLTTKIHSVASGLSGALRKLDSSSSLREIELFSKLFDDLDVRSDSVS 126
AV RL+ ++ + HS LS L + LR+ L F + + +
Sbjct 455 AVLERLEMP----KILERSHSTEPNLSSFLNDPNPMKYLRQQSLPPPKFTATVETTIARA 510
Query 127 SLLDVSTSSA 136
S+LD S S+
Sbjct 511 SVLDTSMSAG 520
Lambda K H
0.313 0.127 0.337
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2683748972
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
Posted date: Sep 17, 2011 11:19 AM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40