bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
164,496 sequences; 82,071,388 total letters
Query= Emax_2967_orf1
Length=89
Score E
Sequences producing significant alignments: (Bits) Value
cpv:cgd3_2620 DNA-directed RNA polymerase,possible RNA polymer... 115 5e-26
bbo:BBOV_I003360 19.m02399; DNA-directed RNA polymerase II lar... 112 2e-25
dre:553347 polr2a, im:7136071; polymerase (RNA) II (DNA direct... 110 7e-25
mmu:20020 Polr2a, 220kDa, Rpb1, Rpo2-1; polymerase (RNA) II (D... 110 7e-25
hsa:5430 POLR2A, MGC75453, POLR2, POLRA, RPB1, RPBh1, RPO2, RP... 110 8e-25
pfa:PFC0805w DNA-directed RNA polymerase II, putative; K03006 ... 104 8e-23
cel:F36A4.7 ama-1; AMAnitin resistant family member (ama-1); K... 92.8 2e-19
hsa:79724 ZNF768, FLJ23436; zinc finger protein 768 62.4
mmu:233890 Zfp768, BC026432, MGC31345, Znf768; zinc finger pro... 61.6 5e-10
tgo:TGME49_025260 DNA-directed RNA polymerase II largest subun... 60.5 1e-09
tpv:TP03_0185 DNA-directed RNA polymerase II largest subunit (... 53.5 1e-07
ath:AT4G35800 NRPB1; NRPB1 (RNA POLYMERASE II LARGE SUBUNIT); ... 52.0 5e-07
sce:YDL140C RPO21, RPB1, RPB220, SUA8; B220 (EC:2.7.7.6); K030... 40.4 0.001
hsa:7455 ZAN; zonadhesin 40.4 0.001
cel:C09D1.1 unc-89; UNCoordinated family member (unc-89) 37.4 0.012
xla:379648 kirrel2, MGC68902; kin of IRRE like 2 31.2
hsa:100134663 hypothetical protein LOC100134663 31.2 0.88
tgo:TGME49_044130 hypothetical protein 27.7 8.0
> cpv:cgd3_2620 DNA-directed RNA polymerase,possible RNA polymerase
A/beta'/A'' subunit, long PHYSPTS repeat ; K03006 DNA-directed
RNA polymerase II subunit RPB1 [EC:2.7.7.6]
Length=1902
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/89 (84%), Positives = 76/89 (85%), Gaps = 0/89 (0%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTS 60
SPTSP YSPTSP YSPTSP YSPTSP YSPTSP YSPTSP YSPTSP YSP P YSPTS
Sbjct 1711 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS 1770
Query 61 PSYSPTSPSYSPTSPNYSPTSPSYSPSSP 89
P YSPTSP YSPTSP+YSPTSP YSPSSP
Sbjct 1771 PHYSPTSPHYSPTSPHYSPTSPHYSPSSP 1799
Score = 114 bits (284), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/89 (83%), Positives = 76/89 (85%), Gaps = 0/89 (0%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTS 60
SPTSP YSPTSP YSPTSP YSPTSP YSPTSP YSPTSP YSPTSP YSP P YSPTS
Sbjct 1683 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS 1742
Query 61 PSYSPTSPSYSPTSPNYSPTSPSYSPSSP 89
P YSPTSP YSPTSP+YSPTSP YSP+SP
Sbjct 1743 PHYSPTSPHYSPTSPHYSPTSPHYSPTSP 1771
Score = 114 bits (284), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/89 (83%), Positives = 76/89 (85%), Gaps = 0/89 (0%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTS 60
SPTSP YSPTSP YSPTSP YSPTSP YSPTSP YSPTSP YSPTSP YSP P YSPTS
Sbjct 1690 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS 1749
Query 61 PSYSPTSPSYSPTSPNYSPTSPSYSPSSP 89
P YSPTSP YSPTSP+YSPTSP YSP+SP
Sbjct 1750 PHYSPTSPHYSPTSPHYSPTSPHYSPTSP 1778
Score = 114 bits (284), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/89 (83%), Positives = 76/89 (85%), Gaps = 0/89 (0%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTS 60
SPTSP YSPTSP YSPTSP YSPTSP YSPTSP YSPTSP YSPTSP YSP P YSPTS
Sbjct 1697 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS 1756
Query 61 PSYSPTSPSYSPTSPNYSPTSPSYSPSSP 89
P YSPTSP YSPTSP+YSPTSP YSP+SP
Sbjct 1757 PHYSPTSPHYSPTSPHYSPTSPHYSPTSP 1785
Score = 114 bits (284), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/89 (83%), Positives = 76/89 (85%), Gaps = 0/89 (0%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTS 60
SPTSP YSPTSP YSPTSP YSPTSP YSPTSP YSPTSP YSPTSP YSP P YSPTS
Sbjct 1704 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS 1763
Query 61 PSYSPTSPSYSPTSPNYSPTSPSYSPSSP 89
P YSPTSP YSPTSP+YSPTSP YSP+SP
Sbjct 1764 PHYSPTSPHYSPTSPHYSPTSPHYSPTSP 1792
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/89 (82%), Positives = 76/89 (85%), Gaps = 0/89 (0%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTS 60
SPTSP YSPTSP YSPTSP YSPTSP YSPTSP YSPTSP YSPTSP YSP P YSPTS
Sbjct 1725 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS 1784
Query 61 PSYSPTSPSYSPTSPNYSPTSPSYSPSSP 89
P YSPTSP YSP+SP+YSPTSP YSP+SP
Sbjct 1785 PHYSPTSPHYSPSSPHYSPTSPQYSPTSP 1813
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/89 (82%), Positives = 76/89 (85%), Gaps = 0/89 (0%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTS 60
SPTSP YSPTSP YSPTSP YSPTSP YSPTSP YSPTSP YSPTSP YSP P YSPTS
Sbjct 1718 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS 1777
Query 61 PSYSPTSPSYSPTSPNYSPTSPSYSPSSP 89
P YSPTSP YSPTSP+YSP+SP YSP+SP
Sbjct 1778 PHYSPTSPHYSPTSPHYSPSSPHYSPTSP 1806
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/89 (80%), Positives = 76/89 (85%), Gaps = 0/89 (0%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTS 60
SPTSP YSPTSP YSPTSP YSPTSP YSPTSP YSPTSP YSPTSP YSP P YSPTS
Sbjct 1732 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS 1791
Query 61 PSYSPTSPSYSPTSPNYSPTSPSYSPSSP 89
P YSP+SP YSPTSP YSPTSP+Y+P+SP
Sbjct 1792 PHYSPSSPHYSPTSPQYSPTSPNYNPASP 1820
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/88 (80%), Positives = 75/88 (85%), Gaps = 0/88 (0%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTS 60
SPTSP YSPTSP YSPTSP YSPTSP YSPTSP YSPTSP YSPTSP YSP P YSP+S
Sbjct 1739 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSS 1798
Query 61 PSYSPTSPSYSPTSPNYSPTSPSYSPSS 88
P YSPTSP YSPTSPNY+P SP+YSP+S
Sbjct 1799 PHYSPTSPQYSPTSPNYNPASPNYSPTS 1826
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/89 (80%), Positives = 75/89 (84%), Gaps = 1/89 (1%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTS 60
SPTSP YSPTSP YSPTSP YSPTSP YSPTSP YSPTSP YSPTSP YSP P YSPTS
Sbjct 1746 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPTS 1805
Query 61 PSYSPTSPSYSPTSPNYSPTSPSYSPSSP 89
P YSPTSP+Y+P SPNYSPTS YSP+SP
Sbjct 1806 PQYSPTSPNYNPASPNYSPTS-HYSPTSP 1833
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/89 (79%), Positives = 73/89 (82%), Gaps = 0/89 (0%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTS 60
S SP SPTSP YSPTSP YSPTSP YSPTSP YSPTSP YSPTSP YSP P YSPTS
Sbjct 1676 SNISPDLSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS 1735
Query 61 PSYSPTSPSYSPTSPNYSPTSPSYSPSSP 89
P YSPTSP YSPTSP+YSPTSP YSP+SP
Sbjct 1736 PHYSPTSPHYSPTSPHYSPTSPHYSPTSP 1764
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/83 (73%), Positives = 69/83 (83%), Gaps = 6/83 (7%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTS 60
SPTSP YSPTSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP+Y+P P+YSPTS
Sbjct 1767 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPTSPQYSPTSPNYNPASPNYSPTS 1826
Query 61 ------PSYSPTSPSYSPTSPNY 77
P+Y+PTSP+YSP+SPNY
Sbjct 1827 HYSPTSPNYNPTSPNYSPSSPNY 1849
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 70/102 (68%), Gaps = 14/102 (13%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSY---- 56
SP+SP YSPTSP YSPTSP+Y+P SP+YSPTS YSPTSP+Y+PTSP+YSP P+Y
Sbjct 1795 SPSSPHYSPTSPQYSPTSPNYNPASPNYSPTS-HYSPTSPNYNPTSPNYSPSSPNYISNN 1853
Query 57 ------SPTSPSYSPTSPSYSPTSPNYSP---TSPSYSPSSP 89
SP+SP Y P + + P SP+YS YSPSSP
Sbjct 1854 SGSPGYSPSSPQYDPIAVASVPRSPSYSVGKMVDAEYSPSSP 1895
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 48/96 (50%), Gaps = 40/96 (41%)
Query 34 SYSPTSPSYSPTSPSY------------------------------------SPDQ---- 53
Y+PTSP Y+ +SP+Y SPD
Sbjct 1627 DYTPTSPIYAASSPTYNTEVSERARKKYKVNNTLSSYSPSSPLNSDNKISNISPDLSPTS 1686
Query 54 PSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPSSP 89
P YSPTSP YSPTSP YSPTSP+YSPTSP YSP+SP
Sbjct 1687 PHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSP 1722
> bbo:BBOV_I003360 19.m02399; DNA-directed RNA polymerase II largest
subunit (EC:2.7.7.6); K03006 DNA-directed RNA polymerase
II subunit RPB1 [EC:2.7.7.6]
Length=1746
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/91 (78%), Positives = 81/91 (89%), Gaps = 2/91 (2%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPDQPSYSP 58
SPTSP+YSPTSP+YSPTSP+YSPTSP+YSPTSP+YSPTSP+ Y PTSP+Y P P+YSP
Sbjct 1645 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPNLGYLPTSPAYRPTSPAYSP 1704
Query 59 TSPSYSPTSPSYSPTSPNYSPTSPSYSPSSP 89
TSP+YSPTSP+YSPTSP YSPTSP YSP P
Sbjct 1705 TSPAYSPTSPAYSPTSPVYSPTSPEYSPEDP 1735
Score = 110 bits (276), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/91 (79%), Positives = 82/91 (90%), Gaps = 2/91 (2%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTS 60
SP SP+YSPTSP YSPTSP YSPTSP+YSPTSP+YSPTSP+YSPTSP+YSP P+YSPTS
Sbjct 1603 SPASPAYSPTSPLYSPTSPVYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 1662
Query 61 PSYSPTSPSYSPTSPNYSPTSPS--YSPSSP 89
P+YSPTSP+YSPTSP YSPTSP+ Y P+SP
Sbjct 1663 PAYSPTSPAYSPTSPAYSPTSPNLGYLPTSP 1693
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/83 (81%), Positives = 77/83 (92%), Gaps = 0/83 (0%)
Query 7 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTSPSYSPT 66
YSP SP+YSPTSP YSPTSP YSPTSP+YSPTSP+YSPTSP+YSP P+YSPTSP+YSPT
Sbjct 1602 YSPASPAYSPTSPLYSPTSPVYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1661
Query 67 SPSYSPTSPNYSPTSPSYSPSSP 89
SP+YSPTSP YSPTSP+YSP+SP
Sbjct 1662 SPAYSPTSPAYSPTSPAYSPTSP 1684
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/89 (76%), Positives = 75/89 (84%), Gaps = 0/89 (0%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTS 60
SPTSP YSPTSP Y YSP SP+YSPTSP YSPTSP YSPTSP+YSP P+YSPTS
Sbjct 1582 SPTSPVYSPTSPVYGQAGGVYSPASPAYSPTSPLYSPTSPVYSPTSPAYSPTSPAYSPTS 1641
Query 61 PSYSPTSPSYSPTSPNYSPTSPSYSPSSP 89
P+YSPTSP+YSPTSP YSPTSP+YSP+SP
Sbjct 1642 PAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1670
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/89 (75%), Positives = 78/89 (87%), Gaps = 3/89 (3%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPSYSPDQPSYSP 58
SPTSP+YSPTSP+YSPTSP+YSPTSP+YSPTSP+ Y PTSP+Y PTSP+YSP P+YSP
Sbjct 1652 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPNLGYLPTSPAYRPTSPAYSPTSPAYSP 1711
Query 59 TSPSYSPTSPSYSPTSPNYSPTSPSYSPS 87
TSP+YSPTSP YSPTSP YSP P +SP+
Sbjct 1712 TSPAYSPTSPVYSPTSPEYSPEDP-FSPN 1739
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/89 (71%), Positives = 71/89 (79%), Gaps = 0/89 (0%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTS 60
SP+ SPTSP YSPTSP Y YSP SP+YSPTSP YSPTSP YSP P+YSPTS
Sbjct 1575 SPSMGMMSPTSPVYSPTSPVYGQAGGVYSPASPAYSPTSPLYSPTSPVYSPTSPAYSPTS 1634
Query 61 PSYSPTSPSYSPTSPNYSPTSPSYSPSSP 89
P+YSPTSP+YSPTSP YSPTSP+YSP+SP
Sbjct 1635 PAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1663
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 80/123 (65%), Gaps = 34/123 (27%)
Query 1 SPTSPSYSPTSP----------SY------------------------SPTSPSYSPTSP 26
SP SPSY+P SP S SP SP+YSPTSP
Sbjct 1555 SPVSPSYAPLSPNPLSPNPLSPSMGMMSPTSPVYSPTSPVYGQAGGVYSPASPAYSPTSP 1614
Query 27 SYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSP 86
YSPTSP YSPTSP+YSPTSP+YSP P+YSPTSP+YSPTSP+YSPTSP YSPTSP+YSP
Sbjct 1615 LYSPTSPVYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1674
Query 87 SSP 89
+SP
Sbjct 1675 TSP 1677
> dre:553347 polr2a, im:7136071; polymerase (RNA) II (DNA directed)
polypeptide A; K03006 DNA-directed RNA polymerase II subunit
RPB1 [EC:2.7.7.6]
Length=1972
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/92 (78%), Positives = 80/92 (86%), Gaps = 3/92 (3%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTS 60
SPTSP YSPTSP YSPTSP+YSPT+P YSPTSP+YSPTSP+Y+PTSP YSP P+YSPTS
Sbjct 1865 SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTS 1924
Query 61 PSYSPTSPSYSPTSPN---YSPTSPSYSPSSP 89
P YSPTSP+YSPTSP YSPTSP YSP+SP
Sbjct 1925 PKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP 1956
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/92 (77%), Positives = 79/92 (85%), Gaps = 3/92 (3%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTS 60
+PTSP YSPTSP YSPTSP YSPTSP+YSPT+P YSPTSP+YSPTSP+Y+P P YSPTS
Sbjct 1858 TPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTS 1917
Query 61 PSYSPTSPSYSPTSPNYSPTSPS---YSPSSP 89
P+YSPTSP YSPTSP YSPTSP YSP+SP
Sbjct 1918 PTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP 1949
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/90 (77%), Positives = 79/90 (87%), Gaps = 3/90 (3%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTS 60
SPTSP YSPTSP+YSPT+P YSPTSP+YSPTSP+Y+PTSP YSPTSP+YSP P YSPTS
Sbjct 1872 SPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTSPKYSPTS 1931
Query 61 PSYSPTSPS---YSPTSPNYSPTSPSYSPS 87
P+YSPTSP YSPTSP YSPTSP+YSP+
Sbjct 1932 PTYSPTSPKGSTYSPTSPGYSPTSPTYSPA 1961
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/84 (78%), Positives = 75/84 (89%), Gaps = 0/84 (0%)
Query 6 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTSPSYSP 65
Y+PTSP YSPTSP YSPTSP YSPTSP+YSPT+P YSPTSP+YSP P+Y+PTSP YSP
Sbjct 1856 EYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSP 1915
Query 66 TSPSYSPTSPNYSPTSPSYSPSSP 89
TSP+YSPTSP YSPTSP+YSP+SP
Sbjct 1916 TSPTYSPTSPKYSPTSPTYSPTSP 1939
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 49/99 (49%), Gaps = 21/99 (21%)
Query 4 SPSYSPTSPSY-SPTSPSYSPTSPSYSPTSPSYSPT-SPSYSPT---------------S 46
+P+Y SPS S +P + SPS + + +SP SP++SPT S
Sbjct 1522 TPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPASPYIPS 1581
Query 47 PSYSPDQPSYSPTSPSYSPTSPSYSPTSP--NYSPTSPS 83
P Y + SP+YSPTSP+Y P SP Y+P SP
Sbjct 1582 PGYIT--LHFGALSPNYSPTSPAYEPRSPGGGYTPQSPG 1618
> mmu:20020 Polr2a, 220kDa, Rpb1, Rpo2-1; polymerase (RNA) II
(DNA directed) polypeptide A (EC:2.7.7.6); K03006 DNA-directed
RNA polymerase II subunit RPB1 [EC:2.7.7.6]
Length=1932
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/92 (78%), Positives = 79/92 (85%), Gaps = 3/92 (3%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTS 60
SPTSP YSPTSP YSPTSP+YSPT+P YSPTSP+YSPTSP Y+PTSP YSP P+YSPTS
Sbjct 1823 SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS 1882
Query 61 PSYSPTSPSYSPTSPN---YSPTSPSYSPSSP 89
P YSPTSP+YSPTSP YSPTSP YSP+SP
Sbjct 1883 PKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP 1914
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/92 (77%), Positives = 79/92 (85%), Gaps = 3/92 (3%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTS 60
SPTSP YSPTSP+YSPT+P YSPTSP+YSPTSP Y+PTSP YSPTSP+YSP P YSPTS
Sbjct 1830 SPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTS 1889
Query 61 PSYSPTSPS---YSPTSPNYSPTSPSYSPSSP 89
P+YSPTSP YSPTSP YSPTSP+YS +SP
Sbjct 1890 PTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP 1921
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/92 (76%), Positives = 77/92 (83%), Gaps = 3/92 (3%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTS 60
+P SP YSPTSP YSPTSP YSPTSP+YSPT+P YSPTSP+YSPTSP Y+P P YSPTS
Sbjct 1816 TPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTS 1875
Query 61 PSYSPTSPSYSPTSPNYSPTSPS---YSPSSP 89
P+YSPTSP YSPTSP YSPTSP YSP+SP
Sbjct 1876 PTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP 1907
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/84 (77%), Positives = 73/84 (86%), Gaps = 0/84 (0%)
Query 6 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTSPSYSP 65
Y+P SP YSPTSP YSPTSP YSPTSP+YSPT+P YSPTSP+YSP P Y+PTSP YSP
Sbjct 1814 EYTPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSP 1873
Query 66 TSPSYSPTSPNYSPTSPSYSPSSP 89
TSP+YSPTSP YSPTSP+YSP+SP
Sbjct 1874 TSPTYSPTSPKYSPTSPTYSPTSP 1897
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/91 (74%), Positives = 75/91 (82%), Gaps = 3/91 (3%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTS 60
SPTSP+YSPT+P YSPTSP+YSPTSP Y+PTSP YSPTSP+YSPTSP YSP P+YSPTS
Sbjct 1837 SPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTS 1896
Query 61 PS---YSPTSPSYSPTSPNYSPTSPSYSPSS 88
P YSPTSP YSPTSP YS TSP+ SP
Sbjct 1897 PKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1927
> hsa:5430 POLR2A, MGC75453, POLR2, POLRA, RPB1, RPBh1, RPO2,
RPOL2, RpIILS, hRPB220, hsRPB1; polymerase (RNA) II (DNA directed)
polypeptide A, 220kDa (EC:2.7.7.6 2.7.7.48); K03006 DNA-directed
RNA polymerase II subunit RPB1 [EC:2.7.7.6]
Length=1970
Score = 110 bits (276), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/92 (78%), Positives = 79/92 (85%), Gaps = 3/92 (3%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTS 60
SPTSP YSPTSP YSPTSP+YSPT+P YSPTSP+YSPTSP Y+PTSP YSP P+YSPTS
Sbjct 1861 SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS 1920
Query 61 PSYSPTSPSYSPTSPN---YSPTSPSYSPSSP 89
P YSPTSP+YSPTSP YSPTSP YSP+SP
Sbjct 1921 PKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP 1952
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/92 (77%), Positives = 78/92 (84%), Gaps = 3/92 (3%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTS 60
+PTSP YSPTSP YSPTSP YSPTSP+YSPT+P YSPTSP+YSPTSP Y+P P YSPTS
Sbjct 1854 TPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTS 1913
Query 61 PSYSPTSPSYSPTSPNYSPTSPS---YSPSSP 89
P+YSPTSP YSPTSP YSPTSP YSP+SP
Sbjct 1914 PTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP 1945
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/92 (77%), Positives = 79/92 (85%), Gaps = 3/92 (3%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTS 60
SPTSP YSPTSP+YSPT+P YSPTSP+YSPTSP Y+PTSP YSPTSP+YSP P YSPTS
Sbjct 1868 SPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTS 1927
Query 61 PSYSPTSPS---YSPTSPNYSPTSPSYSPSSP 89
P+YSPTSP YSPTSP YSPTSP+YS +SP
Sbjct 1928 PTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP 1959
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/84 (78%), Positives = 74/84 (88%), Gaps = 0/84 (0%)
Query 6 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTSPSYSP 65
Y+PTSP YSPTSP YSPTSP YSPTSP+YSPT+P YSPTSP+YSP P Y+PTSP YSP
Sbjct 1852 EYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSP 1911
Query 66 TSPSYSPTSPNYSPTSPSYSPSSP 89
TSP+YSPTSP YSPTSP+YSP+SP
Sbjct 1912 TSPTYSPTSPKYSPTSPTYSPTSP 1935
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/91 (74%), Positives = 75/91 (82%), Gaps = 3/91 (3%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTS 60
SPTSP+YSPT+P YSPTSP+YSPTSP Y+PTSP YSPTSP+YSPTSP YSP P+YSPTS
Sbjct 1875 SPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTS 1934
Query 61 PS---YSPTSPSYSPTSPNYSPTSPSYSPSS 88
P YSPTSP YSPTSP YS TSP+ SP
Sbjct 1935 PKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1965
> pfa:PFC0805w DNA-directed RNA polymerase II, putative; K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
Length=2457
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/100 (71%), Positives = 73/100 (73%), Gaps = 11/100 (11%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTS 60
S TSP YSPTSP YSPTSP YSPTSP YSPTSP YSPTSP YSPTSP YSP P YSPTS
Sbjct 2289 SVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS 2348
Query 61 PSYSPTSPS-----------YSPTSPNYSPTSPSYSPSSP 89
P YSPTSP YS TSP +SPTSP+YS SSP
Sbjct 2349 PKYSPTSPVAQNIASPNYSPYSITSPKFSPTSPAYSISSP 2388
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/99 (67%), Positives = 69/99 (69%), Gaps = 11/99 (11%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTS 60
SPTSP YSPTSP YSPTSP YSPTSP YSPTSP YSPTSP YSPTSP YSP P YSPTS
Sbjct 2296 SPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS 2355
Query 61 PS-----------YSPTSPSYSPTSPNYSPTSPSYSPSS 88
P YS TSP +SPTSP YS +SP Y S
Sbjct 2356 PVAQNIASPNYSPYSITSPKFSPTSPAYSISSPVYDKSG 2394
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/77 (77%), Positives = 61/77 (79%), Gaps = 0/77 (0%)
Query 6 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTSPSYSP 65
Y+ SP YS TSP YSPTSP YSPTSP YSPTSP YSPTSP YSP P YSPTSP YSP
Sbjct 2280 QYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSP 2339
Query 66 TSPSYSPTSPNYSPTSP 82
TSP YSPTSP YSPTSP
Sbjct 2340 TSPKYSPTSPKYSPTSP 2356
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/107 (65%), Positives = 73/107 (68%), Gaps = 18/107 (16%)
Query 1 SPTSPSY-------SPTSPS-----------YSPTSPSYSPTSPSYSPTSPSYSPTSPSY 42
SPTSP+Y SPTSP Y+ SP YS TSP YSPTSP YSPTSP Y
Sbjct 2250 SPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKY 2309
Query 43 SPTSPSYSPDQPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPSSP 89
SPTSP YSP P YSPTSP YSPTSP YSPTSP YSPTSP YSP+SP
Sbjct 2310 SPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSP 2356
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 59/94 (62%), Gaps = 12/94 (12%)
Query 8 SPTSPSYSPT-SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQ-----------PS 55
+P +SP +++ SPSYSPTSP+Y+ + YSPTSP DQ P
Sbjct 2228 NPMLDIFSPKPQINHNIYSPSYSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPV 2287
Query 56 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPSSP 89
YS TSP YSPTSP YSPTSP YSPTSP YSP+SP
Sbjct 2288 YSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSP 2321
> cel:F36A4.7 ama-1; AMAnitin resistant family member (ama-1);
K03006 DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
Length=1852
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/115 (61%), Positives = 83/115 (72%), Gaps = 26/115 (22%)
Query 1 SPTSPSYSPTSPSYSPTSPSY--------------------SPTSPSYSPTSPSYSPTSP 40
SPTSP+YSPTSP+YSPTSPSY SPTSPSYSPTSP YSPTSP
Sbjct 1690 SPTSPTYSPTSPTYSPTSPSYESGGGYSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSP 1749
Query 41 SYSPTSPSYSPDQPSYSPTSPS------YSPTSPSYSPTSPNYSPTSPSYSPSSP 89
YSP+SP+Y+P P+Y+PTSP YSPTSP+YSPTSP+Y+P+SP YSP+SP
Sbjct 1750 QYSPSSPTYTPSSPTYNPTSPRGFSSPQYSPTSPTYSPTSPSYTPSSPQYSPTSP 1804
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/83 (73%), Positives = 74/83 (89%), Gaps = 3/83 (3%)
Query 6 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSPDQPSYSPTSPSYS 64
+YSPTSPSYSPTSP YSPTSP YSP+SP+Y+P+SP+Y+PTSP +S P YSPTSP+YS
Sbjct 1729 TYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRGFSS--PQYSPTSPTYS 1786
Query 65 PTSPSYSPTSPNYSPTSPSYSPS 87
PTSPSY+P+SP YSPTSP+Y+PS
Sbjct 1787 PTSPSYTPSSPQYSPTSPTYTPS 1809
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/110 (60%), Positives = 79/110 (71%), Gaps = 26/110 (23%)
Query 6 SYSPTSPSYSPTSPSYSPTSPSYSPTSPS--------------------YSPTSPSYSPT 45
+YSPTSP+YSPTSP+YSPTSP+YSPTSPS YSPTSPSYSPT
Sbjct 1681 TYSPTSPTYSPTSPTYSPTSPTYSPTSPSYESGGGYSPSSPKYSPSSPTYSPTSPSYSPT 1740
Query 46 SPSYSPDQPSYSPTSPSYSPTSPSYSPTSPN------YSPTSPSYSPSSP 89
SP YSP P YSP+SP+Y+P+SP+Y+PTSP YSPTSP+YSP+SP
Sbjct 1741 SPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRGFSSPQYSPTSPTYSPTSP 1790
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 63/81 (77%), Gaps = 13/81 (16%)
Query 1 SPTSPSYSPTSPS------YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQP 54
+P+SP+Y+PTSP YSPTSP+YSPTSPSY+P+SP YSPTSP+Y+P SPS +QP
Sbjct 1759 TPSSPTYNPTSPRGFSSPQYSPTSPTYSPTSPSYTPSSPQYSPTSPTYTP-SPS---EQP 1814
Query 55 SYSPTSPSYSPTSPSYSPTSP 75
TS YSPTSP+YSP+SP
Sbjct 1815 G---TSAQYSPTSPTYSPSSP 1832
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
Query 1 SPTSPSYSPTSPS-YSPTSPSYSPTSPSYSPTSPSYSPTSPS 41
SP +PSY SP YSP+SP +S TSP YSPTSPSYSPTSP+
Sbjct 1561 SPRTPSYGGMSPGVYSPSSPQFSMTSPHYSPTSPSYSPTSPA 1602
> hsa:79724 ZNF768, FLJ23436; zinc finger protein 768
Length=540
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 43/85 (50%), Gaps = 0/85 (0%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTS 60
P SP + P SP + P SP + P SP + SP P SP ++P SP P + S
Sbjct 59 EPQSPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQS 118
Query 61 PSYSPTSPSYSPTSPNYSPTSPSYS 85
P Y P SP Y P SP Y P SP Y
Sbjct 119 PRYEPQSPGYEPRSPGYEPRSPGYE 143
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 42/84 (50%), Gaps = 0/84 (0%)
Query 6 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTSPSYSP 65
P SP + P SP + P SP + P SP + SP P SP ++P P SP +
Sbjct 57 GLEPQSPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFES 116
Query 66 TSPSYSPTSPNYSPTSPSYSPSSP 89
SP Y P SP Y P SP Y P SP
Sbjct 117 QSPRYEPQSPGYEPRSPGYEPRSP 140
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 0/79 (0%)
Query 4 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTSPSY 63
SP ++P SP SP + SP Y P SP Y P SP Y P SP Y + Y +
Sbjct 97 SPEFAPRSPESDSQSPEFESQSPRYEPQSPGYEPRSPGYEPRSPGYESESSRYESQNTEL 156
Query 64 SPTSPSYSPTSPNYSPTSP 82
SP + S + +
Sbjct 157 KTQSPEFEAQSSKFQEGAE 175
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 36/87 (41%), Gaps = 0/87 (0%)
Query 3 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTSPS 62
SP P SP ++P SP SP + SP Y P SP Y P SP Y P P Y S
Sbjct 89 RSPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQSPGYEPRSPGYEPRSPGYESESSR 148
Query 63 YSPTSPSYSPTSPNYSPTSPSYSPSSP 89
Y + SP + S + +
Sbjct 149 YESQNTELKTQSPEFEAQSSKFQEGAE 175
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 30/75 (40%), Gaps = 0/75 (0%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTS 60
+P SP SP + SP Y P SP Y P SP Y P SP Y S Y S
Sbjct 101 APRSPESDSQSPEFESQSPRYEPQSPGYEPRSPGYEPRSPGYESESSRYESQNTELKTQS 160
Query 61 PSYSPTSPSYSPTSP 75
P + S + +
Sbjct 161 PEFEAQSSKFQEGAE 175
> mmu:233890 Zfp768, BC026432, MGC31345, Znf768; zinc finger protein
768
Length=568
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 45/89 (50%), Gaps = 0/89 (0%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTS 60
P SP + P SP + SP + P SP + SP + P SP ++P SP P P + S
Sbjct 62 EPQSPEFEPQSPEFESQSPRFEPESPGFESRSPGFVPPSPEFAPRSPESDPQSPEFESQS 121
Query 61 PSYSPTSPSYSPTSPNYSPTSPSYSPSSP 89
P Y P SP P SP P SP Y P SP
Sbjct 122 PKYEPRSPGCHPRSPGCEPGSPRYEPKSP 150
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 44/89 (49%), Gaps = 0/89 (0%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTS 60
P SP + SP + P SP + SP + P SP ++P SP P SP + P Y P S
Sbjct 69 EPQSPEFESQSPRFEPESPGFESRSPGFVPPSPEFAPRSPESDPQSPEFESQSPKYEPRS 128
Query 61 PSYSPTSPSYSPTSPNYSPTSPSYSPSSP 89
P P SP P SP Y P SP Y SP
Sbjct 129 PGCHPRSPGCEPGSPRYEPKSPGYGSKSP 157
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 43/86 (50%), Gaps = 0/86 (0%)
Query 4 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTSPSY 63
SP + P SP + SP + P SP ++P SP P SP + SP Y P P P SP
Sbjct 79 SPRFEPESPGFESRSPGFVPPSPEFAPRSPESDPQSPEFESQSPKYEPRSPGCHPRSPGC 138
Query 64 SPTSPSYSPTSPNYSPTSPSYSPSSP 89
P SP Y P SP Y SP + SP
Sbjct 139 EPGSPRYEPKSPGYGSKSPEFESQSP 164
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 43/89 (48%), Gaps = 0/89 (0%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTS 60
P SP + SP + P SP ++P SP P SP + SP Y P SP P P P S
Sbjct 83 EPESPGFESRSPGFVPPSPEFAPRSPESDPQSPEFESQSPKYEPRSPGCHPRSPGCEPGS 142
Query 61 PSYSPTSPSYSPTSPNYSPTSPSYSPSSP 89
P Y P SP Y SP + SP Y SP
Sbjct 143 PRYEPKSPGYGSKSPEFESQSPGYESQSP 171
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 42/86 (48%), Gaps = 0/86 (0%)
Query 3 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTSPS 62
SP + P SP ++P SP P SP + SP Y P SP P SP P P Y P SP
Sbjct 92 RSPGFVPPSPEFAPRSPESDPQSPEFESQSPKYEPRSPGCHPRSPGCEPGSPRYEPKSPG 151
Query 63 YSPTSPSYSPTSPNYSPTSPSYSPSS 88
Y SP + SP Y SP Y P +
Sbjct 152 YGSKSPEFESQSPGYESQSPGYEPQN 177
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 35/74 (47%), Gaps = 0/74 (0%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTS 60
+P SP P SP + SP Y P SP P SP P SP Y P SP Y P + S
Sbjct 104 APRSPESDPQSPEFESQSPKYEPRSPGCHPRSPGCEPGSPRYEPKSPGYGSKSPEFESQS 163
Query 61 PSYSPTSPSYSPTS 74
P Y SP Y P +
Sbjct 164 PGYESQSPGYEPQN 177
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 36/84 (42%), Gaps = 0/84 (0%)
Query 2 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTSP 61
P SP + SP Y P SP P SP P SP Y P SP Y SP + P Y SP
Sbjct 112 PQSPEFESQSPKYEPRSPGCHPRSPGCEPGSPRYEPKSPGYGSKSPEFESQSPGYESQSP 171
Query 62 SYSPTSPSYSPTSPNYSPTSPSYS 85
Y P + + + SP +
Sbjct 172 GYEPQNSGDGVQNSEFKTHSPEFE 195
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 35/85 (41%), Gaps = 0/85 (0%)
Query 4 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTSPSY 63
SP Y P SP P SP P SP Y P SP Y SP + SP Y P Y P +
Sbjct 121 SPKYEPRSPGCHPRSPGCEPGSPRYEPKSPGYGSKSPEFESQSPGYESQSPGYEPQNSGD 180
Query 64 SPTSPSYSPTSPNYSPTSPSYSPSS 88
+ + SP + S + +
Sbjct 181 GVQNSEFKTHSPEFETQSSKFQEGA 205
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 32/81 (39%), Gaps = 0/81 (0%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTS 60
P SP P SP P SP Y P SP Y SP + SP Y SP Y P +
Sbjct 125 EPRSPGCHPRSPGCEPGSPRYEPKSPGYGSKSPEFESQSPGYESQSPGYEPQNSGDGVQN 184
Query 61 PSYSPTSPSYSPTSPNYSPTS 81
+ SP + S + +
Sbjct 185 SEFKTHSPEFETQSSKFQEGA 205
> tgo:TGME49_025260 DNA-directed RNA polymerase II largest subunit,
putative (EC:2.7.7.6 3.5.1.16); K03006 DNA-directed RNA
polymerase II subunit RPB1 [EC:2.7.7.6]
Length=1892
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 60/85 (70%), Gaps = 7/85 (8%)
Query 1 SPTSPSY--SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSP 58
SPTSP +PTSP+ SP SP+YSPTSP YSPTSP YSPT YSP SPSY Q P
Sbjct 1741 SPTSPVQQSNPTSPT-SPYSPAYSPTSPRYSPTSPMYSPTFAPYSPQSPSYGAGQ---GP 1796
Query 59 TSPSYSPTSPSYSPTSP-NYSPTSP 82
SPS++ SP YSP+SP YSPTSP
Sbjct 1797 LSPSFTVQSPRYSPSSPAAYSPTSP 1821
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/96 (60%), Positives = 68/96 (70%), Gaps = 9/96 (9%)
Query 1 SPTSPSYSPTSPSYSPTSPSY--SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSP 58
+P SP +S S SYSPTSP +PTSP+ SP SP+YSPTSP YSPTSP YSP YSP
Sbjct 1728 NPMSPHFSA-STSYSPTSPVQQSNPTSPT-SPYSPAYSPTSPRYSPTSPMYSPTFAPYSP 1785
Query 59 TSPSY----SPTSPSYSPTSPNYSPTSP-SYSPSSP 89
SPSY P SPS++ SP YSP+SP +YSP+SP
Sbjct 1786 QSPSYGAGQGPLSPSFTVQSPRYSPSSPAAYSPTSP 1821
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 59/91 (64%), Gaps = 7/91 (7%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSY--SPTSPSYSPTSPSYSPTSPSYSPDQPSYSP 58
SP SPS +P SP +S S SYSPTSP +PTSP+ SP SP+YSPTSP YSP P YSP
Sbjct 1721 SPFSPSNNPMSPHFSA-STSYSPTSPVQQSNPTSPT-SPYSPAYSPTSPRYSPTSPMYSP 1778
Query 59 TSPSYSPTSPSYSPTSPNYSPTSPSYSPSSP 89
T YSP SPSY P SPS++ SP
Sbjct 1779 TFAPYSPQSPSYGAGQ---GPLSPSFTVQSP 1806
> tpv:TP03_0185 DNA-directed RNA polymerase II largest subunit
(EC:2.7.7.6); K03006 DNA-directed RNA polymerase II subunit
RPB1 [EC:2.7.7.6]
Length=1681
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 70/112 (62%), Gaps = 31/112 (27%)
Query 3 TSPSYSPTSPS--YSPTSPSYSPTSPS--YSPTS-------PSYSPTSP--------SYS 43
S+SPTSP+ SPTSP SPTSP SPTS P+YSPTSP + S
Sbjct 1536 LGGSFSPTSPTSPMSPTSP-MSPTSPMSPMSPTSAMSPVYSPAYSPTSPMSPTSPANALS 1594
Query 44 PTSPSYSPDQPSYSPTSP--SYSPT----SPSYSPTSPN--YSPTSPSYSPS 87
PTSP YS P+YSPTSP + SPT SP+YSPTSPN Y+PTSP YSP+
Sbjct 1595 PTSPVYS---PAYSPTSPTSAMSPTSPVYSPAYSPTSPNLGYAPTSPVYSPA 1643
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/84 (59%), Positives = 57/84 (67%), Gaps = 14/84 (16%)
Query 10 TSPSYSPTSPS--YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTSPSYSPTS 67
S+SPTSP+ SPTSP SPTSP SP SP+ S SP YSP +YSPTSP SPTS
Sbjct 1536 LGGSFSPTSPTSPMSPTSP-MSPTSP-MSPMSPT-SAMSPVYSP---AYSPTSP-MSPTS 1588
Query 68 P--SYSPTSPNYSPTSPSYSPSSP 89
P + SPTSP Y SP+YSP+SP
Sbjct 1589 PANALSPTSPVY---SPAYSPTSP 1609
> ath:AT4G35800 NRPB1; NRPB1 (RNA POLYMERASE II LARGE SUBUNIT);
DNA binding / DNA-directed RNA polymerase; K03006 DNA-directed
RNA polymerase II subunit RPB1 [EC:2.7.7.6]
Length=1840
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 32/36 (88%), Gaps = 0/36 (0%)
Query 6 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 41
YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+
Sbjct 1558 GYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA 1593
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 32/36 (88%), Gaps = 0/36 (0%)
Query 13 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 48
YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+
Sbjct 1558 GYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA 1593
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 31/34 (91%), Gaps = 0/34 (0%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 34
SPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+
Sbjct 1560 SPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA 1593
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/32 (81%), Positives = 28/32 (87%), Gaps = 0/32 (0%)
Query 20 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 51
YSPTSP YSPTSP YSPTSP+YSP+SP YSP
Sbjct 1558 GYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 1589
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 51/64 (79%), Gaps = 2/64 (3%)
Query 20 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTSPSYSPTSPSYSPTSPNYSP 79
+YSPTSP YSPTSPSYSPTSPSY PTSPSY+P YSP S +YSP++ SP SP YSP
Sbjct 1698 AYSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSP 1755
Query 80 TSPS 83
TSP+
Sbjct 1756 TSPN 1759
Score = 35.0 bits (79), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 63/118 (53%), Gaps = 44/118 (37%)
Query 1 SPTSPSYSPTSP------------------------------------------SYSPTS 18
SPTSP+YSPTSP +YSPTS
Sbjct 1644 SPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTS 1703
Query 19 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTSPSYSPTSPSYSPTSPN 76
P YSPTSPSYSPTSPSY PTSPSY+P S YSP +YSP++ SP SP YSPTSPN
Sbjct 1704 PGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPTSPN 1759
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 66/116 (56%), Gaps = 31/116 (26%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTS 60
SPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP P YSPTS
Sbjct 1700 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPTS 1757
Query 61 PS----------------------------YSPTSPSYSPTSPNYSPTSPSYSPSS 88
P+ S SP YSP S YSPT P YSPSS
Sbjct 1758 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 1812
> sce:YDL140C RPO21, RPB1, RPB220, SUA8; B220 (EC:2.7.7.6); K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
Length=1733
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/29 (75%), Positives = 24/29 (82%), Gaps = 0/29 (0%)
Query 27 SYSPTSPSYSPTSPSYSPTSPSYSPDQPS 55
+YSPTSPSYSPTSP YSP SP+YSP Q
Sbjct 1695 NYSPTSPSYSPTSPGYSPGSPAYSPKQDE 1723
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/27 (77%), Positives = 23/27 (85%), Gaps = 0/27 (0%)
Query 62 SYSPTSPSYSPTSPNYSPTSPSYSPSS 88
+YSPTSPSYSPTSP YSP SP+YSP
Sbjct 1695 NYSPTSPSYSPTSPGYSPGSPAYSPKQ 1721
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 23/27 (85%), Gaps = 0/27 (0%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPS 27
+PTSP + +SP +SPTSP+YSPTSP+
Sbjct 1529 APTSPGFGVSSPGFSPTSPTYSPTSPA 1555
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 23/27 (85%), Gaps = 0/27 (0%)
Query 8 SPTSPSYSPTSPSYSPTSPSYSPTSPS 34
+PTSP + +SP +SPTSP+YSPTSP+
Sbjct 1529 APTSPGFGVSSPGFSPTSPTYSPTSPA 1555
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 23/27 (85%), Gaps = 0/27 (0%)
Query 15 SPTSPSYSPTSPSYSPTSPSYSPTSPS 41
+PTSP + +SP +SPTSP+YSPTSP+
Sbjct 1529 APTSPGFGVSSPGFSPTSPTYSPTSPA 1555
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 23/27 (85%), Gaps = 0/27 (0%)
Query 22 SPTSPSYSPTSPSYSPTSPSYSPTSPS 48
+PTSP + +SP +SPTSP+YSPTSP+
Sbjct 1529 APTSPGFGVSSPGFSPTSPTYSPTSPA 1555
Score = 32.0 bits (71), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 23/32 (71%), Gaps = 7/32 (21%)
Query 41 SYSPTSPSYSPDQPSYSPTSPSYSPTSPSYSP 72
+YSPTSPSYSP TSP YSP SP+YSP
Sbjct 1695 NYSPTSPSYSP-------TSPGYSPGSPAYSP 1719
Score = 31.6 bits (70), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 17/21 (80%), Positives = 19/21 (90%), Gaps = 0/21 (0%)
Query 69 SYSPTSPNYSPTSPSYSPSSP 89
+YSPTSP+YSPTSP YSP SP
Sbjct 1695 NYSPTSPSYSPTSPGYSPGSP 1715
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 19/23 (82%), Gaps = 0/23 (0%)
Query 29 SPTSPSYSPTSPSYSPTSPSYSP 51
+PTSP + +SP +SPTSP+YSP
Sbjct 1529 APTSPGFGVSSPGFSPTSPTYSP 1551
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%), Gaps = 7/34 (20%)
Query 36 SPTSPSYSPTSPSYSPDQPSYSPTSPSYSPTSPS 69
+PTSP + +S P +SPTSP+YSPTSP+
Sbjct 1529 APTSPGFGVSS-------PGFSPTSPTYSPTSPA 1555
> hsa:7455 ZAN; zonadhesin
Length=2812
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query 4 SPSYSPTSPSYSPTSPSY---SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTS 60
+P+ S P+ S PS PT P PT P+ PT + PT PS P+ PS PT
Sbjct 562 NPTISTKKPTVSIEKPSVTTEKPTVPKEKPTIPTEKPTISTEKPTIPSEKPNMPSEKPTI 621
Query 61 PSYSPTSPSYSPTSPNYSPTSPSYSPS 87
PS PT + PT P+ PT PS P+
Sbjct 622 PSEKPTILTEKPTIPSEKPTIPSEKPT 648
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 33/66 (50%), Gaps = 0/66 (0%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTS 60
PT P PT P+ PT + PT PS P PS PT PS PT + P PS PT
Sbjct 583 KPTVPKEKPTIPTEKPTISTEKPTIPSEKPNMPSEKPTIPSEKPTILTEKPTIPSEKPTI 642
Query 61 PSYSPT 66
PS PT
Sbjct 643 PSEKPT 648
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 40/87 (45%), Gaps = 0/87 (0%)
Query 3 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTSPS 62
T + +PT + PT P+ + PT P PT P+ PT + P PS P PS
Sbjct 557 TGLTENPTISTKKPTVSIEKPSVTTEKPTVPKEKPTIPTEKPTISTEKPTIPSEKPNMPS 616
Query 63 YSPTSPSYSPTSPNYSPTSPSYSPSSP 89
PT PS PT PT PS P+ P
Sbjct 617 EKPTIPSEKPTILTEKPTIPSEKPTIP 643
> cel:C09D1.1 unc-89; UNCoordinated family member (unc-89)
Length=8081
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 35/85 (41%), Gaps = 0/85 (0%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTS 60
P SP+ SP S T SPT SP PTSP+ +SP+ D SPT
Sbjct 1630 KPKSPTKKEKSPEKSATEDVKSPTKKEKSPEKVEEKPTSPTKKESSPTKKTDDEVKSPTK 1689
Query 61 PSYSPTSPSYSPTSPNYSPTSPSYS 85
SP + P SP SP S
Sbjct 1690 KEKSPQTVEEKPASPTKKEKSPEKS 1714
Score = 31.6 bits (70), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 34/89 (38%), Gaps = 0/89 (0%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTS 60
SP P SP+ SP S T SPT SP PTSP+ P+
Sbjct 1623 SPEKADDKPKSPTKKEKSPEKSATEDVKSPTKKEKSPEKVEEKPTSPTKKESSPTKKTDD 1682
Query 61 PSYSPTSPSYSPTSPNYSPTSPSYSPSSP 89
SPT SP + P SP+ SP
Sbjct 1683 EVKSPTKKEKSPQTVEEKPASPTKKEKSP 1711
Score = 31.2 bits (69), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Query 8 SPTSPSYSP-TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTSPSYSPT 66
SPT SP S P SP+ +SP SPT SP++ P SP+
Sbjct 1754 SPTKKEKSPEKSAEEKPKSPTKKESSPVKMADDEVKSPTKKEKSPEKVEEKPASPTKKEK 1813
Query 67 SPSYSPTSPNYSPTSPSYSPSSP 89
+P S SPT SPSSP
Sbjct 1814 TPEKSAAEELKSPTKKEKSPSSP 1836
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 33/86 (38%), Gaps = 0/86 (0%)
Query 4 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTSPSY 63
SP S T SPT SP PTSP+ +SP+ SP + SP +
Sbjct 1640 SPEKSATEDVKSPTKKEKSPEKVEEKPTSPTKKESSPTKKTDDEVKSPTKKEKSPQTVEE 1699
Query 64 SPTSPSYSPTSPNYSPTSPSYSPSSP 89
P SP+ SP S SP
Sbjct 1700 KPASPTKKEKSPEKSVVEEVKSPKEK 1725
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 31/83 (37%), Gaps = 0/83 (0%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTS 60
S T SPT SP PTSP+ +SP+ SPT SP P S
Sbjct 1644 SATEDVKSPTKKEKSPEKVEEKPTSPTKKESSPTKKTDDEVKSPTKKEKSPQTVEEKPAS 1703
Query 61 PSYSPTSPSYSPTSPNYSPTSPS 83
P+ SP S SP S
Sbjct 1704 PTKKEKSPEKSVVEEVKSPKEKS 1726
Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 36/91 (39%), Gaps = 2/91 (2%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTS 60
P SP+ +SP SPT SP P SP+ +P S + SPT
Sbjct 1769 KPKSPTKKESSPVKMADDEVKSPTKKEKSPEKVEEKPASPTKKEKTPEKSAAEELKSPTK 1828
Query 61 PSYSPTSPSY--SPTSPNYSPTSPSYSPSSP 89
SP+SP+ S SP P P SP
Sbjct 1829 KEKSPSSPTKKTGDESKEKSPEKPEEKPKSP 1859
Score = 28.1 bits (61), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
Query 1 SPTSPSYSPTSPSYSPTSPSYSPT-SPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPT 59
SPT SP P+ SPT S + SP+ SP S SP SP++ P
Sbjct 1576 SPTKKEKSPEKPA-SPTKKSENEVKSPTKKEKSPEKSVVEELKSPKEK--SPEKADDKPK 1632
Query 60 SPSYSPTSPSYSPTSPNYSPTSPSYSPSS 88
SP+ SP S T SPT SP
Sbjct 1633 SPTKKEKSPEKSATEDVKSPTKKEKSPEK 1661
> xla:379648 kirrel2, MGC68902; kin of IRRE like 2
Length=775
Score = 31.2 bits (69), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 0/67 (0%)
Query 6 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTSPSYSP 65
S+ P P++ P PS+ P+Y P P++ P P++ P P++ P P++ ++ P
Sbjct 658 SHLPQGPTHFPPGPSHVSQGPTYLPQGPTHLPQGPTHLPQGPTHLPQGPTHLQQGLTHLP 717
Query 66 TSPSYSP 72
PS P
Sbjct 718 PGPSQHP 724
Score = 30.8 bits (68), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 0/68 (0%)
Query 20 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTSPSYSPTSPSYSPTSPNYSP 79
S+ P P++ P PS+ P+Y P P++ P P++ P P++ P P++ + P
Sbjct 658 SHLPQGPTHFPPGPSHVSQGPTYLPQGPTHLPQGPTHLPQGPTHLPQGPTHLQQGLTHLP 717
Query 80 TSPSYSPS 87
PS P+
Sbjct 718 PGPSQHPA 725
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 0/64 (0%)
Query 2 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTSP 61
P P++ P PS+ P+Y P P++ P P++ P P++ P P++ ++ P P
Sbjct 661 PQGPTHFPPGPSHVSQGPTYLPQGPTHLPQGPTHLPQGPTHLPQGPTHLQQGLTHLPPGP 720
Query 62 SYSP 65
S P
Sbjct 721 SQHP 724
> hsa:100134663 hypothetical protein LOC100134663
Length=454
Score = 31.2 bits (69), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query 10 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTSPSYSPTSPS 69
SP + SP + P + P SP + SP + SP YS P YSP SP SP
Sbjct 2 VSPHFPLVSPHH-PLVSLHHPVSPHFPLVSPHHPLMSPHYSLVSPQYSPVSPHCPLVSPH 60
Query 70 YSPTSPNYSPTSPSYS 85
YS SP+ SP S
Sbjct 61 YSLVSPHRPLVSPLLS 76
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 29/65 (44%), Gaps = 0/65 (0%)
Query 7 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTSPSYSPT 66
+ P + P SP + SP + SP YS SP YSP SP P YS SP
Sbjct 12 HHPLVSLHHPVSPHFPLVSPHHPLMSPHYSLVSPQYSPVSPHCPLVSPHYSLVSPHRPLV 71
Query 67 SPSYS 71
SP S
Sbjct 72 SPLLS 76
> tgo:TGME49_044130 hypothetical protein
Length=2325
Score = 27.7 bits (60), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query 25 SPSYSPTSPSYSPTSPSYSPTSPSYSPDQPSYSPTSPSYSPTS-PSYSPTSPNYSPTSPS 83
SP P+SP P+SP P+SP P P P+SP + +S P P+SP P+SP
Sbjct 664 SPVLRPSSPFLGPSSPFLGPSSPFLGPSSPFLGPSSPYHRESSSPFLGPSSPGLGPSSPL 723
Query 84 YSPSS 88
PSS
Sbjct 724 LQPSS 728
Lambda K H
0.290 0.110 0.323
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2017039696
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
Posted date: Sep 17, 2011 11:19 AM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40